Gene : Bradi4g42300 B. distachyon v3.1
Defline:  (1 of 3) 3.1.3.66 - Phosphatidylinositol-3,4-bisphosphate 4-phosphatase / Phosphoinositide 4-phosphatase Genomic Order:  5447
Name:  ? Bradi4g42300 Secondary Identifier:  ? PAC:32789101
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY-6368 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g42300 0.5kb upstream 0.5kb upstream 13270 true Bd4: 46287812-46301081 Brachypodium distachyon
Bradi4g42300 0.5kb upstream 0.5kb upstream 500 false Bd4: 46287812-46288311 Brachypodium distachyon
Bradi4g42300 0.5kb downstream 0.5kb downstream 13270 true Bd4: 46288312-46301581 Brachypodium distachyon
Bradi4g42300 0.5kb downstream 0.5kb downstream 500 false Bd4: 46301082-46301581 Brachypodium distachyon
Bradi4g42300 1.0kb upstream 1.0kb upstream 13770 true Bd4: 46287312-46301081 Brachypodium distachyon
Bradi4g42300 1.0kb upstream 1.0kb upstream 1000 false Bd4: 46287312-46288311 Brachypodium distachyon
Bradi4g42300 1.0kb downstream 1.0kb downstream 13770 true Bd4: 46288312-46302081 Brachypodium distachyon
Bradi4g42300 1.0kb downstream 1.0kb downstream 1000 false Bd4: 46301082-46302081 Brachypodium distachyon
Bradi4g42300 2.0kb upstream 2.0kb upstream 14770 true Bd4: 46286312-46301081 Brachypodium distachyon
Bradi4g42300 2.0kb upstream 2.0kb upstream 2000 false Bd4: 46286312-46288311 Brachypodium distachyon
Bradi4g42300 2.0kb downstream 2.0kb downstream 14770 true Bd4: 46288312-46303081 Brachypodium distachyon
Bradi4g42300 2.0kb downstream 2.0kb downstream 2000 false Bd4: 46301082-46303081 Brachypodium distachyon
Bradi4g42300 5.0kb upstream 5.0kb upstream 17770 true Bd4: 46283312-46301081 Brachypodium distachyon
Bradi4g42300 5.0kb upstream 5.0kb upstream 5000 false Bd4: 46283312-46288311 Brachypodium distachyon
Bradi4g42300 5.0kb downstream 5.0kb downstream 17770 true Bd4: 46288312-46306081 Brachypodium distachyon
Bradi4g42300 5.0kb downstream 5.0kb downstream 5000 false Bd4: 46301082-46306081 Brachypodium distachyon
Bradi4g42300 10.0kb upstream 10.0kb upstream 22770 true Bd4: 46278312-46301081 Brachypodium distachyon
Bradi4g42300 10.0kb upstream 10.0kb upstream 10000 false Bd4: 46278312-46288311 Brachypodium distachyon
Bradi4g42300 10.0kb downstream 10.0kb downstream 22770 true Bd4: 46288312-46311081 Brachypodium distachyon
Bradi4g42300 10.0kb downstream 10.0kb downstream 10000 false Bd4: 46301082-46311081 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124583862 5269 Grass View MSA
122044264 5273 Angiosperm View MSA
121351625 5274 Embryophyte View MSA
123428410 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.826        
cufflinks 2.247        
cufflinks 2.386        
cufflinks 2.016        
cufflinks 1.229       Low
cufflinks 2.137        
cufflinks 1.936        
cufflinks 1.662        
cufflinks 2.081        
cufflinks 1.702        
cufflinks 1.851        
cufflinks 2.209        
cufflinks 1.873        
cufflinks 1.494        
cufflinks 1.59        
cufflinks 2.211        
cufflinks 1.571        
cufflinks 4.022       High
cufflinks 1.982        
cufflinks 1.19       Low
cufflinks 2.157        
cufflinks 2.483        
cufflinks 1.738        
cufflinks 2.022        
cufflinks 1.97        
cufflinks 2.162        
cufflinks 1.879        
cufflinks 2.151        
cufflinks 2.07        
cufflinks 2.628        

0 Strain