Gene : Bradi3g12650 B. distachyon v3.1
Defline:  (1 of 1) PTHR27008//PTHR27008:SF28 - FAMILY NOT NAMED // KINASE-LIKE PROTEIN TMKL1-RELATED Genomic Order:  1559
Name:  ? Bradi3g12650 Secondary Identifier:  ? PAC:32821133
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g12650 0.5kb upstream 0.5kb upstream 2432 true Bd3: 11369005-11371436 Brachypodium distachyon
Bradi3g12650 0.5kb upstream 0.5kb upstream 500 false Bd3: 11370937-11371436 Brachypodium distachyon
Bradi3g12650 0.5kb downstream 0.5kb downstream 2432 true Bd3: 11368505-11370936 Brachypodium distachyon
Bradi3g12650 0.5kb downstream 0.5kb downstream 500 false Bd3: 11368505-11369004 Brachypodium distachyon
Bradi3g12650 1.0kb upstream 1.0kb upstream 2932 true Bd3: 11369005-11371936 Brachypodium distachyon
Bradi3g12650 1.0kb upstream 1.0kb upstream 1000 false Bd3: 11370937-11371936 Brachypodium distachyon
Bradi3g12650 1.0kb downstream 1.0kb downstream 2932 true Bd3: 11368005-11370936 Brachypodium distachyon
Bradi3g12650 1.0kb downstream 1.0kb downstream 1000 false Bd3: 11368005-11369004 Brachypodium distachyon
Bradi3g12650 2.0kb upstream 2.0kb upstream 3932 true Bd3: 11369005-11372936 Brachypodium distachyon
Bradi3g12650 2.0kb upstream 2.0kb upstream 2000 false Bd3: 11370937-11372936 Brachypodium distachyon
Bradi3g12650 2.0kb downstream 2.0kb downstream 3932 true Bd3: 11367005-11370936 Brachypodium distachyon
Bradi3g12650 2.0kb downstream 2.0kb downstream 2000 false Bd3: 11367005-11369004 Brachypodium distachyon
Bradi3g12650 5.0kb upstream 5.0kb upstream 6932 true Bd3: 11369005-11375936 Brachypodium distachyon
Bradi3g12650 5.0kb upstream 5.0kb upstream 5000 false Bd3: 11370937-11375936 Brachypodium distachyon
Bradi3g12650 5.0kb downstream 5.0kb downstream 6932 true Bd3: 11364005-11370936 Brachypodium distachyon
Bradi3g12650 5.0kb downstream 5.0kb downstream 5000 false Bd3: 11364005-11369004 Brachypodium distachyon
Bradi3g12650 10.0kb upstream 10.0kb upstream 11932 true Bd3: 11369005-11380936 Brachypodium distachyon
Bradi3g12650 10.0kb upstream 10.0kb upstream 10000 false Bd3: 11370937-11380936 Brachypodium distachyon
Bradi3g12650 10.0kb downstream 10.0kb downstream 11932 true Bd3: 11359005-11370936 Brachypodium distachyon
Bradi3g12650 10.0kb downstream 10.0kb downstream 10000 false Bd3: 11359005-11369004 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124580766 5269 Grass View MSA
122044440 5273 Angiosperm View MSA
121348994 5274 Embryophyte View MSA
123381116 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.308        
cufflinks 0.511        
cufflinks 0.524        
cufflinks 0.519        
cufflinks 0.589        
cufflinks 0.51        
cufflinks 0.587        
cufflinks 0.379        
cufflinks 0.508        
cufflinks 0.238        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.248        
cufflinks 0.031     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.069     Low Low
cufflinks 0.453        
cufflinks 0.404        
cufflinks 0.522        
cufflinks 0.793        
cufflinks 0.126     Low  
cufflinks 0.866       High
cufflinks 0.401        
cufflinks 0.439        
cufflinks 0.586        
cufflinks 0.449        
cufflinks 0.317        
cufflinks 0.025     Low Low
cufflinks 0.48        
cufflinks 0.687        
cufflinks 0.735        

0 Strain