Gene : Bradi3g17550 B. distachyon v3.1
Defline:  (1 of 1) PTHR22604:SF123 - BCDNA.GH03377 Genomic Order:  2218
Name:  ? Bradi3g17550 Secondary Identifier:  ? PAC:32818804
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g17550 0.5kb upstream 0.5kb upstream 4128 true Bd3: 15886323-15890450 Brachypodium distachyon
Bradi3g17550 0.5kb upstream 0.5kb upstream 500 false Bd3: 15889951-15890450 Brachypodium distachyon
Bradi3g17550 0.5kb downstream 0.5kb downstream 4128 true Bd3: 15885823-15889950 Brachypodium distachyon
Bradi3g17550 0.5kb downstream 0.5kb downstream 500 false Bd3: 15885823-15886322 Brachypodium distachyon
Bradi3g17550 1.0kb upstream 1.0kb upstream 4628 true Bd3: 15886323-15890950 Brachypodium distachyon
Bradi3g17550 1.0kb upstream 1.0kb upstream 1000 false Bd3: 15889951-15890950 Brachypodium distachyon
Bradi3g17550 1.0kb downstream 1.0kb downstream 4628 true Bd3: 15885323-15889950 Brachypodium distachyon
Bradi3g17550 1.0kb downstream 1.0kb downstream 1000 false Bd3: 15885323-15886322 Brachypodium distachyon
Bradi3g17550 2.0kb upstream 2.0kb upstream 5628 true Bd3: 15886323-15891950 Brachypodium distachyon
Bradi3g17550 2.0kb upstream 2.0kb upstream 2000 false Bd3: 15889951-15891950 Brachypodium distachyon
Bradi3g17550 2.0kb downstream 2.0kb downstream 5628 true Bd3: 15884323-15889950 Brachypodium distachyon
Bradi3g17550 2.0kb downstream 2.0kb downstream 2000 false Bd3: 15884323-15886322 Brachypodium distachyon
Bradi3g17550 5.0kb upstream 5.0kb upstream 8628 true Bd3: 15886323-15894950 Brachypodium distachyon
Bradi3g17550 5.0kb upstream 5.0kb upstream 5000 false Bd3: 15889951-15894950 Brachypodium distachyon
Bradi3g17550 5.0kb downstream 5.0kb downstream 8628 true Bd3: 15881323-15889950 Brachypodium distachyon
Bradi3g17550 5.0kb downstream 5.0kb downstream 5000 false Bd3: 15881323-15886322 Brachypodium distachyon
Bradi3g17550 10.0kb upstream 10.0kb upstream 13628 true Bd3: 15886323-15899950 Brachypodium distachyon
Bradi3g17550 10.0kb upstream 10.0kb upstream 10000 false Bd3: 15889951-15899950 Brachypodium distachyon
Bradi3g17550 10.0kb downstream 10.0kb downstream 13628 true Bd3: 15876323-15889950 Brachypodium distachyon
Bradi3g17550 10.0kb downstream 10.0kb downstream 10000 false Bd3: 15876323-15886322 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040870 5273 Angiosperm View MSA
124575981 5269 Grass View MSA
121344130 5274 Embryophyte View MSA
123379980 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.357        
cufflinks 5.204        
cufflinks 4.663        
cufflinks 6.542       High
cufflinks 3.556        
cufflinks 4.006        
cufflinks 3.957        
cufflinks 3.272        
cufflinks 3.011        
cufflinks 3.987        
cufflinks 5.751       High
cufflinks 3.743        
cufflinks 6.155       High
cufflinks 4.371        
cufflinks 4.011        
cufflinks 3.29        
cufflinks 4.077        
cufflinks 1.934       Low
cufflinks 3.532        
cufflinks 0.799       Low
cufflinks 3.018        
cufflinks 4.233        
cufflinks 3.626        
cufflinks 3.849        
cufflinks 3.951        
cufflinks 6.297       High
cufflinks 5.189        
cufflinks 5.285        
cufflinks 4.392        
cufflinks 3.06        

0 Strain