Gene : Bradi4g39430 B. distachyon v3.1
Defline:  (1 of 1) PF14661 - HAUS augmin-like complex subunit 6 N-terminus (HAUS6_N) Genomic Order:  5077
Name:  ? Bradi4g39430 Secondary Identifier:  ? PAC:32790590
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g39430 0.5kb upstream 0.5kb upstream 9651 true Bd4: 43983150-43992800 Brachypodium distachyon
Bradi4g39430 0.5kb upstream 0.5kb upstream 500 false Bd4: 43992301-43992800 Brachypodium distachyon
Bradi4g39430 0.5kb downstream 0.5kb downstream 9651 true Bd4: 43982650-43992300 Brachypodium distachyon
Bradi4g39430 0.5kb downstream 0.5kb downstream 500 false Bd4: 43982650-43983149 Brachypodium distachyon
Bradi4g39430 1.0kb upstream 1.0kb upstream 10151 true Bd4: 43983150-43993300 Brachypodium distachyon
Bradi4g39430 1.0kb upstream 1.0kb upstream 1000 false Bd4: 43992301-43993300 Brachypodium distachyon
Bradi4g39430 1.0kb downstream 1.0kb downstream 10151 true Bd4: 43982150-43992300 Brachypodium distachyon
Bradi4g39430 1.0kb downstream 1.0kb downstream 1000 false Bd4: 43982150-43983149 Brachypodium distachyon
Bradi4g39430 2.0kb upstream 2.0kb upstream 11151 true Bd4: 43983150-43994300 Brachypodium distachyon
Bradi4g39430 2.0kb upstream 2.0kb upstream 2000 false Bd4: 43992301-43994300 Brachypodium distachyon
Bradi4g39430 2.0kb downstream 2.0kb downstream 11151 true Bd4: 43981150-43992300 Brachypodium distachyon
Bradi4g39430 2.0kb downstream 2.0kb downstream 2000 false Bd4: 43981150-43983149 Brachypodium distachyon
Bradi4g39430 5.0kb upstream 5.0kb upstream 14151 true Bd4: 43983150-43997300 Brachypodium distachyon
Bradi4g39430 5.0kb upstream 5.0kb upstream 5000 false Bd4: 43992301-43997300 Brachypodium distachyon
Bradi4g39430 5.0kb downstream 5.0kb downstream 14151 true Bd4: 43978150-43992300 Brachypodium distachyon
Bradi4g39430 5.0kb downstream 5.0kb downstream 5000 false Bd4: 43978150-43983149 Brachypodium distachyon
Bradi4g39430 10.0kb upstream 10.0kb upstream 19151 true Bd4: 43983150-44002300 Brachypodium distachyon
Bradi4g39430 10.0kb upstream 10.0kb upstream 10000 false Bd4: 43992301-44002300 Brachypodium distachyon
Bradi4g39430 10.0kb downstream 10.0kb downstream 19151 true Bd4: 43973150-43992300 Brachypodium distachyon
Bradi4g39430 10.0kb downstream 10.0kb downstream 10000 false Bd4: 43973150-43983149 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124568297 5269 Grass View MSA
122045582 5273 Angiosperm View MSA
121351307 5274 Embryophyte View MSA
123382113 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.746        
cufflinks 5.274        
cufflinks 6.282        
cufflinks 4.062        
cufflinks 2.793        
cufflinks 4.443        
cufflinks 4.183        
cufflinks 4.389        
cufflinks 4.439        
cufflinks 3.499        
cufflinks 2.179       Low
cufflinks 4.284        
cufflinks 1.468       Low
cufflinks 1.567       Low
cufflinks 2.101       Low
cufflinks 4.683        
cufflinks 3.568        
cufflinks 10.707       High
cufflinks 6.799       High
cufflinks 2.31        
cufflinks 5.864        
cufflinks 6.686        
cufflinks 4.652        
cufflinks 4.205        
cufflinks 3.715        
cufflinks 5.776        
cufflinks 1.723       Low
cufflinks 5.779        
cufflinks 5.575        
cufflinks 7.674       High

0 Strain