Gene : Bradi3g17770 B. distachyon v3.1
Defline:  (1 of 1) K15407 - queuine tRNA-ribosyltransferase subunit QTRTD1 [EC:2.4.2.29] (QTRTD1) Genomic Order:  2249
Name:  ? Bradi3g17770 Secondary Identifier:  ? PAC:32815896
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g17770 0.5kb upstream 0.5kb upstream 5280 true Bd3: 16132194-16137473 Brachypodium distachyon
Bradi3g17770 0.5kb upstream 0.5kb upstream 500 false Bd3: 16136974-16137473 Brachypodium distachyon
Bradi3g17770 0.5kb downstream 0.5kb downstream 5280 true Bd3: 16131694-16136973 Brachypodium distachyon
Bradi3g17770 0.5kb downstream 0.5kb downstream 500 false Bd3: 16131694-16132193 Brachypodium distachyon
Bradi3g17770 1.0kb upstream 1.0kb upstream 5780 true Bd3: 16132194-16137973 Brachypodium distachyon
Bradi3g17770 1.0kb upstream 1.0kb upstream 1000 false Bd3: 16136974-16137973 Brachypodium distachyon
Bradi3g17770 1.0kb downstream 1.0kb downstream 5780 true Bd3: 16131194-16136973 Brachypodium distachyon
Bradi3g17770 1.0kb downstream 1.0kb downstream 1000 false Bd3: 16131194-16132193 Brachypodium distachyon
Bradi3g17770 2.0kb upstream 2.0kb upstream 6780 true Bd3: 16132194-16138973 Brachypodium distachyon
Bradi3g17770 2.0kb upstream 2.0kb upstream 2000 false Bd3: 16136974-16138973 Brachypodium distachyon
Bradi3g17770 2.0kb downstream 2.0kb downstream 6780 true Bd3: 16130194-16136973 Brachypodium distachyon
Bradi3g17770 2.0kb downstream 2.0kb downstream 2000 false Bd3: 16130194-16132193 Brachypodium distachyon
Bradi3g17770 5.0kb upstream 5.0kb upstream 9780 true Bd3: 16132194-16141973 Brachypodium distachyon
Bradi3g17770 5.0kb upstream 5.0kb upstream 5000 false Bd3: 16136974-16141973 Brachypodium distachyon
Bradi3g17770 5.0kb downstream 5.0kb downstream 9780 true Bd3: 16127194-16136973 Brachypodium distachyon
Bradi3g17770 5.0kb downstream 5.0kb downstream 5000 false Bd3: 16127194-16132193 Brachypodium distachyon
Bradi3g17770 10.0kb upstream 10.0kb upstream 14780 true Bd3: 16132194-16146973 Brachypodium distachyon
Bradi3g17770 10.0kb upstream 10.0kb upstream 10000 false Bd3: 16136974-16146973 Brachypodium distachyon
Bradi3g17770 10.0kb downstream 10.0kb downstream 14780 true Bd3: 16122194-16136973 Brachypodium distachyon
Bradi3g17770 10.0kb downstream 10.0kb downstream 10000 false Bd3: 16122194-16132193 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124572694 5269 Grass View MSA
122048440 5273 Angiosperm View MSA
121348371 5274 Embryophyte View MSA
123426152 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.753        
cufflinks 1.208        
cufflinks 1.333       High
cufflinks 1.135        
cufflinks 0.62       Low
cufflinks 1.101        
cufflinks 1.083        
cufflinks 1.019        
cufflinks 1.146        
cufflinks 1.235        
cufflinks 0.887        
cufflinks 0.996        
cufflinks 0.731        
cufflinks 0.707        
cufflinks 0.671       Low
cufflinks 1.172        
cufflinks 0.906        
cufflinks 1.384       High
cufflinks 0.798        
cufflinks 0.426       Low
cufflinks 0.875        
cufflinks 1.177        
cufflinks 0.896        
cufflinks 0.918        
cufflinks 1.088        
cufflinks 1.469       High
cufflinks 0.947        
cufflinks 1.283       High
cufflinks 1.141        
cufflinks 1.003        

0 Strain