Gene : Bradi3g18140 B. distachyon v3.1
Defline:  (1 of 1) PTHR11764//PTHR11764:SF17 - LANOSTEROL SYNTHASE // SUBFAMILY NOT NAMED Genomic Order:  2302
Name:  ? Bradi3g18140 Secondary Identifier:  ? PAC:32812119
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY-2541 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g18140 0.5kb upstream 0.5kb upstream 8553 true Bd3: 16597665-16606217 Brachypodium distachyon
Bradi3g18140 0.5kb upstream 0.5kb upstream 500 false Bd3: 16597665-16598164 Brachypodium distachyon
Bradi3g18140 0.5kb downstream 0.5kb downstream 8553 true Bd3: 16598165-16606717 Brachypodium distachyon
Bradi3g18140 0.5kb downstream 0.5kb downstream 500 false Bd3: 16606218-16606717 Brachypodium distachyon
Bradi3g18140 1.0kb upstream 1.0kb upstream 9053 true Bd3: 16597165-16606217 Brachypodium distachyon
Bradi3g18140 1.0kb upstream 1.0kb upstream 1000 false Bd3: 16597165-16598164 Brachypodium distachyon
Bradi3g18140 1.0kb downstream 1.0kb downstream 9053 true Bd3: 16598165-16607217 Brachypodium distachyon
Bradi3g18140 1.0kb downstream 1.0kb downstream 1000 false Bd3: 16606218-16607217 Brachypodium distachyon
Bradi3g18140 2.0kb upstream 2.0kb upstream 10053 true Bd3: 16596165-16606217 Brachypodium distachyon
Bradi3g18140 2.0kb upstream 2.0kb upstream 2000 false Bd3: 16596165-16598164 Brachypodium distachyon
Bradi3g18140 2.0kb downstream 2.0kb downstream 10053 true Bd3: 16598165-16608217 Brachypodium distachyon
Bradi3g18140 2.0kb downstream 2.0kb downstream 2000 false Bd3: 16606218-16608217 Brachypodium distachyon
Bradi3g18140 5.0kb upstream 5.0kb upstream 13053 true Bd3: 16593165-16606217 Brachypodium distachyon
Bradi3g18140 5.0kb upstream 5.0kb upstream 5000 false Bd3: 16593165-16598164 Brachypodium distachyon
Bradi3g18140 5.0kb downstream 5.0kb downstream 13053 true Bd3: 16598165-16611217 Brachypodium distachyon
Bradi3g18140 5.0kb downstream 5.0kb downstream 5000 false Bd3: 16606218-16611217 Brachypodium distachyon
Bradi3g18140 10.0kb upstream 10.0kb upstream 18053 true Bd3: 16588165-16606217 Brachypodium distachyon
Bradi3g18140 10.0kb upstream 10.0kb upstream 10000 false Bd3: 16588165-16598164 Brachypodium distachyon
Bradi3g18140 10.0kb downstream 10.0kb downstream 18053 true Bd3: 16598165-16616217 Brachypodium distachyon
Bradi3g18140 10.0kb downstream 10.0kb downstream 10000 false Bd3: 16606218-16616217 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028235 5273 Angiosperm View MSA
124581907 5269 Grass View MSA
121297756 5274 Embryophyte View MSA
123335781 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.019     Low  
cufflinks 0.007     Low  
cufflinks 0.028     Low  
cufflinks 0.029     Low  
cufflinks 0.003     Low Low
cufflinks 0.037     Low  
cufflinks 0.015     Low  
cufflinks 0.019     Low  
cufflinks 0.012     Low  
cufflinks 0.01     Low  
cufflinks 0.032     Low  
cufflinks 0.012     Low  
cufflinks 0.009     Low  
cufflinks 0.01     Low  
cufflinks 0.004     Low Low
cufflinks 0.016     Low  
cufflinks 0.005     Low Low
cufflinks 0.017     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.008     Low  
cufflinks 0.012     Low  
cufflinks 0.01     Low  
cufflinks 0.01     Low  
cufflinks 0.003     Low Low
cufflinks 0.014     Low  
cufflinks 0.031     Low  
cufflinks 0.021     Low  
cufflinks 0.028     Low  
cufflinks 0.009     Low  

0 Strain