Gene : Bradi4g39530 B. distachyon v3.1
Defline:  (1 of 1) PTHR21043 - IOJAP SUPERFAMILY ORTHOLOG Genomic Order:  5090
Name:  ? Bradi4g39530 Secondary Identifier:  ? PAC:32788524
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g39530 0.5kb upstream 0.5kb upstream 4404 true Bd4: 44070163-44074566 Brachypodium distachyon
Bradi4g39530 0.5kb upstream 0.5kb upstream 500 false Bd4: 44070163-44070662 Brachypodium distachyon
Bradi4g39530 0.5kb downstream 0.5kb downstream 4404 true Bd4: 44070663-44075066 Brachypodium distachyon
Bradi4g39530 0.5kb downstream 0.5kb downstream 500 false Bd4: 44074567-44075066 Brachypodium distachyon
Bradi4g39530 1.0kb upstream 1.0kb upstream 4904 true Bd4: 44069663-44074566 Brachypodium distachyon
Bradi4g39530 1.0kb upstream 1.0kb upstream 1000 false Bd4: 44069663-44070662 Brachypodium distachyon
Bradi4g39530 1.0kb downstream 1.0kb downstream 4904 true Bd4: 44070663-44075566 Brachypodium distachyon
Bradi4g39530 1.0kb downstream 1.0kb downstream 1000 false Bd4: 44074567-44075566 Brachypodium distachyon
Bradi4g39530 2.0kb upstream 2.0kb upstream 5904 true Bd4: 44068663-44074566 Brachypodium distachyon
Bradi4g39530 2.0kb upstream 2.0kb upstream 2000 false Bd4: 44068663-44070662 Brachypodium distachyon
Bradi4g39530 2.0kb downstream 2.0kb downstream 5904 true Bd4: 44070663-44076566 Brachypodium distachyon
Bradi4g39530 2.0kb downstream 2.0kb downstream 2000 false Bd4: 44074567-44076566 Brachypodium distachyon
Bradi4g39530 5.0kb upstream 5.0kb upstream 8904 true Bd4: 44065663-44074566 Brachypodium distachyon
Bradi4g39530 5.0kb upstream 5.0kb upstream 5000 false Bd4: 44065663-44070662 Brachypodium distachyon
Bradi4g39530 5.0kb downstream 5.0kb downstream 8904 true Bd4: 44070663-44079566 Brachypodium distachyon
Bradi4g39530 5.0kb downstream 5.0kb downstream 5000 false Bd4: 44074567-44079566 Brachypodium distachyon
Bradi4g39530 10.0kb upstream 10.0kb upstream 13904 true Bd4: 44060663-44074566 Brachypodium distachyon
Bradi4g39530 10.0kb upstream 10.0kb upstream 10000 false Bd4: 44060663-44070662 Brachypodium distachyon
Bradi4g39530 10.0kb downstream 10.0kb downstream 13904 true Bd4: 44070663-44084566 Brachypodium distachyon
Bradi4g39530 10.0kb downstream 10.0kb downstream 10000 false Bd4: 44074567-44084566 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124574043 5269 Grass View MSA
122047007 5273 Angiosperm View MSA
121349437 5274 Embryophyte View MSA
123381310 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.044        
cufflinks 5.727        
cufflinks 5.709        
cufflinks 7.466        
cufflinks 5.985        
cufflinks 4.679        
cufflinks 5.41        
cufflinks 4.934        
cufflinks 4.806        
cufflinks 7.437        
cufflinks 4.113       Low
cufflinks 3.502       Low
cufflinks 4.184       Low
cufflinks 4.952        
cufflinks 5.245        
cufflinks 4.986        
cufflinks 9.445       High
cufflinks 4.763        
cufflinks 10.969       High
cufflinks 6.603        
cufflinks 8.668       High
cufflinks 4.938        
cufflinks 4.837        
cufflinks 5.437        
cufflinks 5.894        
cufflinks 6.285        
cufflinks 5.252        
cufflinks 7.307        
cufflinks 6.063        
cufflinks 5.616        

0 Strain