Gene : Bradi3g18750 B. distachyon v3.1
Defline:  (1 of 1) PTHR11122//PTHR11122:SF20 - APOSPORY-ASSOCIATED PROTEIN C-RELATED // SUBFAMILY NOT NAMED Genomic Order:  2397
Name:  ? Bradi3g18750 Secondary Identifier:  ? PAC:32815912
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g18750 0.5kb upstream 0.5kb upstream 5126 true Bd3: 17346900-17352025 Brachypodium distachyon
Bradi3g18750 0.5kb upstream 0.5kb upstream 500 false Bd3: 17351526-17352025 Brachypodium distachyon
Bradi3g18750 0.5kb downstream 0.5kb downstream 5126 true Bd3: 17346400-17351525 Brachypodium distachyon
Bradi3g18750 0.5kb downstream 0.5kb downstream 500 false Bd3: 17346400-17346899 Brachypodium distachyon
Bradi3g18750 1.0kb upstream 1.0kb upstream 5626 true Bd3: 17346900-17352525 Brachypodium distachyon
Bradi3g18750 1.0kb upstream 1.0kb upstream 1000 false Bd3: 17351526-17352525 Brachypodium distachyon
Bradi3g18750 1.0kb downstream 1.0kb downstream 5626 true Bd3: 17345900-17351525 Brachypodium distachyon
Bradi3g18750 1.0kb downstream 1.0kb downstream 1000 false Bd3: 17345900-17346899 Brachypodium distachyon
Bradi3g18750 2.0kb upstream 2.0kb upstream 6626 true Bd3: 17346900-17353525 Brachypodium distachyon
Bradi3g18750 2.0kb upstream 2.0kb upstream 2000 false Bd3: 17351526-17353525 Brachypodium distachyon
Bradi3g18750 2.0kb downstream 2.0kb downstream 6626 true Bd3: 17344900-17351525 Brachypodium distachyon
Bradi3g18750 2.0kb downstream 2.0kb downstream 2000 false Bd3: 17344900-17346899 Brachypodium distachyon
Bradi3g18750 5.0kb upstream 5.0kb upstream 9626 true Bd3: 17346900-17356525 Brachypodium distachyon
Bradi3g18750 5.0kb upstream 5.0kb upstream 5000 false Bd3: 17351526-17356525 Brachypodium distachyon
Bradi3g18750 5.0kb downstream 5.0kb downstream 9626 true Bd3: 17341900-17351525 Brachypodium distachyon
Bradi3g18750 5.0kb downstream 5.0kb downstream 5000 false Bd3: 17341900-17346899 Brachypodium distachyon
Bradi3g18750 10.0kb upstream 10.0kb upstream 14626 true Bd3: 17346900-17361525 Brachypodium distachyon
Bradi3g18750 10.0kb upstream 10.0kb upstream 10000 false Bd3: 17351526-17361525 Brachypodium distachyon
Bradi3g18750 10.0kb downstream 10.0kb downstream 14626 true Bd3: 17336900-17351525 Brachypodium distachyon
Bradi3g18750 10.0kb downstream 10.0kb downstream 10000 false Bd3: 17336900-17346899 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124573130 5269 Grass View MSA
122047038 5273 Angiosperm View MSA
121347358 5274 Embryophyte View MSA
123428689 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.267     High  
cufflinks 16.338     High  
cufflinks 21.048     High High
cufflinks 18.54     High High
cufflinks 11.37     High  
cufflinks 9.138        
cufflinks 10.508     High  
cufflinks 6.904       Low
cufflinks 8.604       Low
cufflinks 15.326     High  
cufflinks 19.368     High High
cufflinks 8.06       Low
cufflinks 12.571     High  
cufflinks 18.815     High High
cufflinks 10.183     High  
cufflinks 12.377     High  
cufflinks 12.51     High  
cufflinks 12.952     High  
cufflinks 12.58        
cufflinks 9.258        
cufflinks 12.955     High  
cufflinks 18.946     High High
cufflinks 7.104       Low
cufflinks 9.477     High  
cufflinks 9.545        
cufflinks 20.487     High High
cufflinks 8.629       Low
cufflinks 20.89     High High
cufflinks 19.02     High High
cufflinks 7.021       Low

0 Strain