Gene : Bradi4g39110 B. distachyon v3.1
Defline:  (1 of 9) PF11891 - Domain of unknown function (DUF3411) (DUF3411) Genomic Order:  5036
Name:  ? Bradi4g39110 Secondary Identifier:  ? PAC:32789737
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g39110 0.5kb upstream 0.5kb upstream 6121 true Bd4: 43709285-43715405 Brachypodium distachyon
Bradi4g39110 0.5kb upstream 0.5kb upstream 500 false Bd4: 43709285-43709784 Brachypodium distachyon
Bradi4g39110 0.5kb downstream 0.5kb downstream 6121 true Bd4: 43709785-43715905 Brachypodium distachyon
Bradi4g39110 0.5kb downstream 0.5kb downstream 500 false Bd4: 43715406-43715905 Brachypodium distachyon
Bradi4g39110 1.0kb upstream 1.0kb upstream 6621 true Bd4: 43708785-43715405 Brachypodium distachyon
Bradi4g39110 1.0kb upstream 1.0kb upstream 1000 false Bd4: 43708785-43709784 Brachypodium distachyon
Bradi4g39110 1.0kb downstream 1.0kb downstream 6621 true Bd4: 43709785-43716405 Brachypodium distachyon
Bradi4g39110 1.0kb downstream 1.0kb downstream 1000 false Bd4: 43715406-43716405 Brachypodium distachyon
Bradi4g39110 2.0kb upstream 2.0kb upstream 7621 true Bd4: 43707785-43715405 Brachypodium distachyon
Bradi4g39110 2.0kb upstream 2.0kb upstream 2000 false Bd4: 43707785-43709784 Brachypodium distachyon
Bradi4g39110 2.0kb downstream 2.0kb downstream 7621 true Bd4: 43709785-43717405 Brachypodium distachyon
Bradi4g39110 2.0kb downstream 2.0kb downstream 2000 false Bd4: 43715406-43717405 Brachypodium distachyon
Bradi4g39110 5.0kb upstream 5.0kb upstream 10621 true Bd4: 43704785-43715405 Brachypodium distachyon
Bradi4g39110 5.0kb upstream 5.0kb upstream 5000 false Bd4: 43704785-43709784 Brachypodium distachyon
Bradi4g39110 5.0kb downstream 5.0kb downstream 10621 true Bd4: 43709785-43720405 Brachypodium distachyon
Bradi4g39110 5.0kb downstream 5.0kb downstream 5000 false Bd4: 43715406-43720405 Brachypodium distachyon
Bradi4g39110 10.0kb upstream 10.0kb upstream 15621 true Bd4: 43699785-43715405 Brachypodium distachyon
Bradi4g39110 10.0kb upstream 10.0kb upstream 10000 false Bd4: 43699785-43709784 Brachypodium distachyon
Bradi4g39110 10.0kb downstream 10.0kb downstream 15621 true Bd4: 43709785-43725405 Brachypodium distachyon
Bradi4g39110 10.0kb downstream 10.0kb downstream 10000 false Bd4: 43715406-43725405 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041223 5273 Angiosperm View MSA
124577775 5269 Grass View MSA
121346356 5274 Embryophyte View MSA
123428208 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.759     High  
cufflinks 30.811     High  
cufflinks 33.097     High High
cufflinks 27.455     High  
cufflinks 17.419     High  
cufflinks 23.259     High  
cufflinks 26.581     High  
cufflinks 22.394     High  
cufflinks 20.677     High  
cufflinks 26.042     High  
cufflinks 15.801     High  
cufflinks 28.997     High  
cufflinks 13.383     High Low
cufflinks 12.472     High Low
cufflinks 18.59     High  
cufflinks 26.872     High  
cufflinks 20.862     High  
cufflinks 14.32     High Low
cufflinks 33.441     High High
cufflinks 31.439     High  
cufflinks 18.681     High  
cufflinks 35.564     High High
cufflinks 21.767     High  
cufflinks 20.32     High  
cufflinks 21.513     High  
cufflinks 31.862     High  
cufflinks 11.259     High Low
cufflinks 31.572     High  
cufflinks 33.88     High High
cufflinks 32.345     High High

0 Strain