Gene : Bradi3g18840 B. distachyon v3.1
Defline:  (1 of 2) K06133 - 4'-phosphopantetheinyl transferase (LYS5, acpT) Genomic Order:  2412
Name:  ? Bradi3g18840 Secondary Identifier:  ? PAC:32820629
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY-6012-1 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g18840 0.5kb upstream 0.5kb upstream 5810 true Bd3: 17479507-17485316 Brachypodium distachyon
Bradi3g18840 0.5kb upstream 0.5kb upstream 500 false Bd3: 17479507-17480006 Brachypodium distachyon
Bradi3g18840 0.5kb downstream 0.5kb downstream 5810 true Bd3: 17480007-17485816 Brachypodium distachyon
Bradi3g18840 0.5kb downstream 0.5kb downstream 500 false Bd3: 17485317-17485816 Brachypodium distachyon
Bradi3g18840 1.0kb upstream 1.0kb upstream 6310 true Bd3: 17479007-17485316 Brachypodium distachyon
Bradi3g18840 1.0kb upstream 1.0kb upstream 1000 false Bd3: 17479007-17480006 Brachypodium distachyon
Bradi3g18840 1.0kb downstream 1.0kb downstream 6310 true Bd3: 17480007-17486316 Brachypodium distachyon
Bradi3g18840 1.0kb downstream 1.0kb downstream 1000 false Bd3: 17485317-17486316 Brachypodium distachyon
Bradi3g18840 2.0kb upstream 2.0kb upstream 7310 true Bd3: 17478007-17485316 Brachypodium distachyon
Bradi3g18840 2.0kb upstream 2.0kb upstream 2000 false Bd3: 17478007-17480006 Brachypodium distachyon
Bradi3g18840 2.0kb downstream 2.0kb downstream 7310 true Bd3: 17480007-17487316 Brachypodium distachyon
Bradi3g18840 2.0kb downstream 2.0kb downstream 2000 false Bd3: 17485317-17487316 Brachypodium distachyon
Bradi3g18840 5.0kb upstream 5.0kb upstream 10310 true Bd3: 17475007-17485316 Brachypodium distachyon
Bradi3g18840 5.0kb upstream 5.0kb upstream 5000 false Bd3: 17475007-17480006 Brachypodium distachyon
Bradi3g18840 5.0kb downstream 5.0kb downstream 10310 true Bd3: 17480007-17490316 Brachypodium distachyon
Bradi3g18840 5.0kb downstream 5.0kb downstream 5000 false Bd3: 17485317-17490316 Brachypodium distachyon
Bradi3g18840 10.0kb upstream 10.0kb upstream 15310 true Bd3: 17470007-17485316 Brachypodium distachyon
Bradi3g18840 10.0kb upstream 10.0kb upstream 10000 false Bd3: 17470007-17480006 Brachypodium distachyon
Bradi3g18840 10.0kb downstream 10.0kb downstream 15310 true Bd3: 17480007-17495316 Brachypodium distachyon
Bradi3g18840 10.0kb downstream 10.0kb downstream 10000 false Bd3: 17485317-17495316 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124570135 5269 Grass View MSA
122041832 5273 Angiosperm View MSA
123429078 5275 Viridiplantae View MSA
121344089 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.538        
cufflinks 0.691        
cufflinks 0.733        
cufflinks 0.876        
cufflinks 0.498       Low
cufflinks 0.735        
cufflinks 0.674        
cufflinks 1.048        
cufflinks 0.985        
cufflinks 1.33       High
cufflinks 0.927        
cufflinks 0.777        
cufflinks 1.085        
cufflinks 1.027        
cufflinks 0.821        
cufflinks 0.757        
cufflinks 0.917        
cufflinks 0.69        
cufflinks 0.724        
cufflinks 0.228       Low
cufflinks 0.74        
cufflinks 1.218       High
cufflinks 1.033        
cufflinks 0.909        
cufflinks 0.876        
cufflinks 0.966        
cufflinks 1.105        
cufflinks 0.926        
cufflinks 1.008        
cufflinks 0.639        

0 Strain