Gene : Bradi3g18930 B. distachyon v3.1
Defline:  (1 of 1) PTHR19957//PTHR19957:SF94 - SYNTAXIN Genomic Order:  2425
Name:  ? Bradi3g18930 Secondary Identifier:  ? PAC:32817924
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g18930 0.5kb upstream 0.5kb upstream 6145 true Bd3: 17542544-17548688 Brachypodium distachyon
Bradi3g18930 0.5kb upstream 0.5kb upstream 500 false Bd3: 17548189-17548688 Brachypodium distachyon
Bradi3g18930 0.5kb downstream 0.5kb downstream 6145 true Bd3: 17542044-17548188 Brachypodium distachyon
Bradi3g18930 0.5kb downstream 0.5kb downstream 500 false Bd3: 17542044-17542543 Brachypodium distachyon
Bradi3g18930 1.0kb upstream 1.0kb upstream 6645 true Bd3: 17542544-17549188 Brachypodium distachyon
Bradi3g18930 1.0kb upstream 1.0kb upstream 1000 false Bd3: 17548189-17549188 Brachypodium distachyon
Bradi3g18930 1.0kb downstream 1.0kb downstream 6645 true Bd3: 17541544-17548188 Brachypodium distachyon
Bradi3g18930 1.0kb downstream 1.0kb downstream 1000 false Bd3: 17541544-17542543 Brachypodium distachyon
Bradi3g18930 2.0kb upstream 2.0kb upstream 7645 true Bd3: 17542544-17550188 Brachypodium distachyon
Bradi3g18930 2.0kb upstream 2.0kb upstream 2000 false Bd3: 17548189-17550188 Brachypodium distachyon
Bradi3g18930 2.0kb downstream 2.0kb downstream 7645 true Bd3: 17540544-17548188 Brachypodium distachyon
Bradi3g18930 2.0kb downstream 2.0kb downstream 2000 false Bd3: 17540544-17542543 Brachypodium distachyon
Bradi3g18930 5.0kb upstream 5.0kb upstream 10645 true Bd3: 17542544-17553188 Brachypodium distachyon
Bradi3g18930 5.0kb upstream 5.0kb upstream 5000 false Bd3: 17548189-17553188 Brachypodium distachyon
Bradi3g18930 5.0kb downstream 5.0kb downstream 10645 true Bd3: 17537544-17548188 Brachypodium distachyon
Bradi3g18930 5.0kb downstream 5.0kb downstream 5000 false Bd3: 17537544-17542543 Brachypodium distachyon
Bradi3g18930 10.0kb upstream 10.0kb upstream 15645 true Bd3: 17542544-17558188 Brachypodium distachyon
Bradi3g18930 10.0kb upstream 10.0kb upstream 10000 false Bd3: 17548189-17558188 Brachypodium distachyon
Bradi3g18930 10.0kb downstream 10.0kb downstream 15645 true Bd3: 17532544-17548188 Brachypodium distachyon
Bradi3g18930 10.0kb downstream 10.0kb downstream 10000 false Bd3: 17532544-17542543 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124576770 5269 Grass View MSA
122042907 5273 Angiosperm View MSA
121348883 5274 Embryophyte View MSA
123381058 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.443     High  
cufflinks 6.981       Low
cufflinks 7.385       Low
cufflinks 7.757       Low
cufflinks 7.041       Low
cufflinks 9.134        
cufflinks 6.885       Low
cufflinks 9.789     High  
cufflinks 9.66     High  
cufflinks 15.596     High High
cufflinks 14.381     High High
cufflinks 13.741     High  
cufflinks 13.572     High  
cufflinks 15.412     High High
cufflinks 14.562     High High
cufflinks 9.422        
cufflinks 12.003     High  
cufflinks 10.826        
cufflinks 8.695        
cufflinks 13.187     High  
cufflinks 11.254     High  
cufflinks 15.403     High High
cufflinks 9.784     High  
cufflinks 11.353     High  
cufflinks 9.57        
cufflinks 8.801        
cufflinks 14.605     High High
cufflinks 9.353        
cufflinks 11.587     High  
cufflinks 11.118        

0 Strain