Gene : Bradi3g18990 B. distachyon v3.1
Defline:  (1 of 1) 2.1.3.2 - Aspartate carbamoyltransferase / Carbamylaspartotranskinase Genomic Order:  2436
Name:  ? Bradi3g18990 Secondary Identifier:  ? PAC:32819775
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY0-162 Brachypodium distachyon pathologic  
Bdistachyon PWY-5686 Brachypodium distachyon pathologic  
Bdistachyon PWY-7211 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g18990 0.5kb upstream 0.5kb upstream 4537 true Bd3: 17636701-17641237 Brachypodium distachyon
Bradi3g18990 0.5kb upstream 0.5kb upstream 500 false Bd3: 17640738-17641237 Brachypodium distachyon
Bradi3g18990 0.5kb downstream 0.5kb downstream 4537 true Bd3: 17636201-17640737 Brachypodium distachyon
Bradi3g18990 0.5kb downstream 0.5kb downstream 500 false Bd3: 17636201-17636700 Brachypodium distachyon
Bradi3g18990 1.0kb upstream 1.0kb upstream 5037 true Bd3: 17636701-17641737 Brachypodium distachyon
Bradi3g18990 1.0kb upstream 1.0kb upstream 1000 false Bd3: 17640738-17641737 Brachypodium distachyon
Bradi3g18990 1.0kb downstream 1.0kb downstream 5037 true Bd3: 17635701-17640737 Brachypodium distachyon
Bradi3g18990 1.0kb downstream 1.0kb downstream 1000 false Bd3: 17635701-17636700 Brachypodium distachyon
Bradi3g18990 2.0kb upstream 2.0kb upstream 6037 true Bd3: 17636701-17642737 Brachypodium distachyon
Bradi3g18990 2.0kb upstream 2.0kb upstream 2000 false Bd3: 17640738-17642737 Brachypodium distachyon
Bradi3g18990 2.0kb downstream 2.0kb downstream 6037 true Bd3: 17634701-17640737 Brachypodium distachyon
Bradi3g18990 2.0kb downstream 2.0kb downstream 2000 false Bd3: 17634701-17636700 Brachypodium distachyon
Bradi3g18990 5.0kb upstream 5.0kb upstream 9037 true Bd3: 17636701-17645737 Brachypodium distachyon
Bradi3g18990 5.0kb upstream 5.0kb upstream 5000 false Bd3: 17640738-17645737 Brachypodium distachyon
Bradi3g18990 5.0kb downstream 5.0kb downstream 9037 true Bd3: 17631701-17640737 Brachypodium distachyon
Bradi3g18990 5.0kb downstream 5.0kb downstream 5000 false Bd3: 17631701-17636700 Brachypodium distachyon
Bradi3g18990 10.0kb upstream 10.0kb upstream 14037 true Bd3: 17636701-17650737 Brachypodium distachyon
Bradi3g18990 10.0kb upstream 10.0kb upstream 10000 false Bd3: 17640738-17650737 Brachypodium distachyon
Bradi3g18990 10.0kb downstream 10.0kb downstream 14037 true Bd3: 17626701-17640737 Brachypodium distachyon
Bradi3g18990 10.0kb downstream 10.0kb downstream 10000 false Bd3: 17626701-17636700 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124577983 5269 Grass View MSA
122047002 5273 Angiosperm View MSA
121345349 5274 Embryophyte View MSA
123427161 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.958        
cufflinks 5.52        
cufflinks 4.749        
cufflinks 5.684        
cufflinks 1.88        
cufflinks 4.107        
cufflinks 4.771        
cufflinks 3.09        
cufflinks 3.564        
cufflinks 3.656        
cufflinks 1.998        
cufflinks 2.694        
cufflinks 0.942       Low
cufflinks 1.617        
cufflinks 1.04       Low
cufflinks 4.499        
cufflinks 3.641        
cufflinks 7.005       High
cufflinks 3.644        
cufflinks 0.769       Low
cufflinks 4.82        
cufflinks 2.478        
cufflinks 2.638        
cufflinks 3.475        
cufflinks 4.945        
cufflinks 4.198        
cufflinks 1.844        
cufflinks 3.412        
cufflinks 2.824        
cufflinks 4.408        

0 Strain