Gene : Bradi3g19714 B. distachyon v3.1
Defline:  (1 of 1) PTHR13675:SF1 - EXPRESSED PROTEIN Genomic Order:  2542
Name:  ? Bradi3g19714 Secondary Identifier:  ? PAC:32813062
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g19714 0.5kb upstream 0.5kb upstream 779 true Bd3: 18660135-18660913 Brachypodium distachyon
Bradi3g19714 0.5kb upstream 0.5kb upstream 500 false Bd3: 18660414-18660913 Brachypodium distachyon
Bradi3g19714 0.5kb downstream 0.5kb downstream 779 true Bd3: 18659635-18660413 Brachypodium distachyon
Bradi3g19714 0.5kb downstream 0.5kb downstream 500 false Bd3: 18659635-18660134 Brachypodium distachyon
Bradi3g19714 1.0kb upstream 1.0kb upstream 1279 true Bd3: 18660135-18661413 Brachypodium distachyon
Bradi3g19714 1.0kb upstream 1.0kb upstream 1000 false Bd3: 18660414-18661413 Brachypodium distachyon
Bradi3g19714 1.0kb downstream 1.0kb downstream 1279 true Bd3: 18659135-18660413 Brachypodium distachyon
Bradi3g19714 1.0kb downstream 1.0kb downstream 1000 false Bd3: 18659135-18660134 Brachypodium distachyon
Bradi3g19714 2.0kb upstream 2.0kb upstream 2279 true Bd3: 18660135-18662413 Brachypodium distachyon
Bradi3g19714 2.0kb upstream 2.0kb upstream 2000 false Bd3: 18660414-18662413 Brachypodium distachyon
Bradi3g19714 2.0kb downstream 2.0kb downstream 2279 true Bd3: 18658135-18660413 Brachypodium distachyon
Bradi3g19714 2.0kb downstream 2.0kb downstream 2000 false Bd3: 18658135-18660134 Brachypodium distachyon
Bradi3g19714 5.0kb upstream 5.0kb upstream 5279 true Bd3: 18660135-18665413 Brachypodium distachyon
Bradi3g19714 5.0kb upstream 5.0kb upstream 5000 false Bd3: 18660414-18665413 Brachypodium distachyon
Bradi3g19714 5.0kb downstream 5.0kb downstream 5279 true Bd3: 18655135-18660413 Brachypodium distachyon
Bradi3g19714 5.0kb downstream 5.0kb downstream 5000 false Bd3: 18655135-18660134 Brachypodium distachyon
Bradi3g19714 10.0kb upstream 10.0kb upstream 10279 true Bd3: 18660135-18670413 Brachypodium distachyon
Bradi3g19714 10.0kb upstream 10.0kb upstream 10000 false Bd3: 18660414-18670413 Brachypodium distachyon
Bradi3g19714 10.0kb downstream 10.0kb downstream 10279 true Bd3: 18650135-18660413 Brachypodium distachyon
Bradi3g19714 10.0kb downstream 10.0kb downstream 10000 false Bd3: 18650135-18660134 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124590098 5269 Grass View MSA
122045056 5273 Angiosperm View MSA
121351084 5274 Embryophyte View MSA
123425666 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 48.834     High  
cufflinks 41.479     High  
cufflinks 42.537     High  
cufflinks 39.078     High  
cufflinks 62.367     High High
cufflinks 37.123     High  
cufflinks 36.619     High  
cufflinks 47.387     High  
cufflinks 41.392     High  
cufflinks 36.724     High  
cufflinks 35.71     High  
cufflinks 51.089     High  
cufflinks 37.344     High  
cufflinks 42.738     High  
cufflinks 60.001     High High
cufflinks 41.451     High  
cufflinks 41.7     High  
cufflinks 56.066     High  
cufflinks 58.367     High High
cufflinks 18.246     High Low
cufflinks 54.532     High  
cufflinks 37.924     High  
cufflinks 43.032     High  
cufflinks 45.275     High  
cufflinks 42.731     High  
cufflinks 43.855     High  
cufflinks 52.673     High  
cufflinks 42.243     High  
cufflinks 36.315     High  
cufflinks 58.882     High High

0 Strain