Gene : Bradi3g19740 B. distachyon v3.1
Defline:  (1 of 2) PTHR10050 - DOLICHYL-PHOSPHATE-MANNOSE--PROTEIN MANNOSYLTRANSFERASE Genomic Order:  2548
Name:  ? Bradi3g19740 Secondary Identifier:  ? PAC:32814929
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g19740 0.5kb upstream 0.5kb upstream 5391 true Bd3: 18683295-18688685 Brachypodium distachyon
Bradi3g19740 0.5kb upstream 0.5kb upstream 500 false Bd3: 18688186-18688685 Brachypodium distachyon
Bradi3g19740 0.5kb downstream 0.5kb downstream 5391 true Bd3: 18682795-18688185 Brachypodium distachyon
Bradi3g19740 0.5kb downstream 0.5kb downstream 500 false Bd3: 18682795-18683294 Brachypodium distachyon
Bradi3g19740 1.0kb upstream 1.0kb upstream 5891 true Bd3: 18683295-18689185 Brachypodium distachyon
Bradi3g19740 1.0kb upstream 1.0kb upstream 1000 false Bd3: 18688186-18689185 Brachypodium distachyon
Bradi3g19740 1.0kb downstream 1.0kb downstream 5891 true Bd3: 18682295-18688185 Brachypodium distachyon
Bradi3g19740 1.0kb downstream 1.0kb downstream 1000 false Bd3: 18682295-18683294 Brachypodium distachyon
Bradi3g19740 2.0kb upstream 2.0kb upstream 6891 true Bd3: 18683295-18690185 Brachypodium distachyon
Bradi3g19740 2.0kb upstream 2.0kb upstream 2000 false Bd3: 18688186-18690185 Brachypodium distachyon
Bradi3g19740 2.0kb downstream 2.0kb downstream 6891 true Bd3: 18681295-18688185 Brachypodium distachyon
Bradi3g19740 2.0kb downstream 2.0kb downstream 2000 false Bd3: 18681295-18683294 Brachypodium distachyon
Bradi3g19740 5.0kb upstream 5.0kb upstream 9891 true Bd3: 18683295-18693185 Brachypodium distachyon
Bradi3g19740 5.0kb upstream 5.0kb upstream 5000 false Bd3: 18688186-18693185 Brachypodium distachyon
Bradi3g19740 5.0kb downstream 5.0kb downstream 9891 true Bd3: 18678295-18688185 Brachypodium distachyon
Bradi3g19740 5.0kb downstream 5.0kb downstream 5000 false Bd3: 18678295-18683294 Brachypodium distachyon
Bradi3g19740 10.0kb upstream 10.0kb upstream 14891 true Bd3: 18683295-18698185 Brachypodium distachyon
Bradi3g19740 10.0kb upstream 10.0kb upstream 10000 false Bd3: 18688186-18698185 Brachypodium distachyon
Bradi3g19740 10.0kb downstream 10.0kb downstream 14891 true Bd3: 18673295-18688185 Brachypodium distachyon
Bradi3g19740 10.0kb downstream 10.0kb downstream 10000 false Bd3: 18673295-18683294 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124571144 5269 Grass View MSA
122043043 5273 Angiosperm View MSA
121348450 5274 Embryophyte View MSA
123428555 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.853       Low
cufflinks 2.422        
cufflinks 2.204        
cufflinks 2.787        
cufflinks 4.368       High
cufflinks 2.335        
cufflinks 2.373        
cufflinks 3.432        
cufflinks 3.074        
cufflinks 2.423        
cufflinks 3.132        
cufflinks 2.277        
cufflinks 1.778       Low
cufflinks 2.51        
cufflinks 3.633        
cufflinks 2.167        
cufflinks 4.134       High
cufflinks 3.246        
cufflinks 3.386        
cufflinks 2.62        
cufflinks 2.89        
cufflinks 2.133        
cufflinks 3.267        
cufflinks 2.962        
cufflinks 2.604        
cufflinks 1.783       Low
cufflinks 1.958        
cufflinks 1.829       Low
cufflinks 1.988        
cufflinks 1.819       Low

0 Strain