Gene : Bradi3g15050 B. distachyon v3.1
Defline:  (1 of 2) K01681 - aconitate hydratase (ACO, acnA) Genomic Order:  1874
Name:  ? Bradi3g15050 Secondary Identifier:  ? PAC:32817618
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon GLYOXYLATE-BYPASS Brachypodium distachyon pathologic  
Bdistachyon PWY-5464 Brachypodium distachyon pathologic  
Bdistachyon PWY-561 Brachypodium distachyon pathologic  
Bdistachyon PWY-5690 Brachypodium distachyon pathologic  
Bdistachyon PWY-5913 Brachypodium distachyon pathologic  
Bdistachyon PWY-6549 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g15050 0.5kb upstream 0.5kb upstream 9227 true Bd3: 13346282-13355508 Brachypodium distachyon
Bradi3g15050 0.5kb upstream 0.5kb upstream 500 false Bd3: 13346282-13346781 Brachypodium distachyon
Bradi3g15050 0.5kb downstream 0.5kb downstream 9227 true Bd3: 13346782-13356008 Brachypodium distachyon
Bradi3g15050 0.5kb downstream 0.5kb downstream 500 false Bd3: 13355509-13356008 Brachypodium distachyon
Bradi3g15050 1.0kb upstream 1.0kb upstream 9727 true Bd3: 13345782-13355508 Brachypodium distachyon
Bradi3g15050 1.0kb upstream 1.0kb upstream 1000 false Bd3: 13345782-13346781 Brachypodium distachyon
Bradi3g15050 1.0kb downstream 1.0kb downstream 9727 true Bd3: 13346782-13356508 Brachypodium distachyon
Bradi3g15050 1.0kb downstream 1.0kb downstream 1000 false Bd3: 13355509-13356508 Brachypodium distachyon
Bradi3g15050 2.0kb upstream 2.0kb upstream 10727 true Bd3: 13344782-13355508 Brachypodium distachyon
Bradi3g15050 2.0kb upstream 2.0kb upstream 2000 false Bd3: 13344782-13346781 Brachypodium distachyon
Bradi3g15050 2.0kb downstream 2.0kb downstream 10727 true Bd3: 13346782-13357508 Brachypodium distachyon
Bradi3g15050 2.0kb downstream 2.0kb downstream 2000 false Bd3: 13355509-13357508 Brachypodium distachyon
Bradi3g15050 5.0kb upstream 5.0kb upstream 13727 true Bd3: 13341782-13355508 Brachypodium distachyon
Bradi3g15050 5.0kb upstream 5.0kb upstream 5000 false Bd3: 13341782-13346781 Brachypodium distachyon
Bradi3g15050 5.0kb downstream 5.0kb downstream 13727 true Bd3: 13346782-13360508 Brachypodium distachyon
Bradi3g15050 5.0kb downstream 5.0kb downstream 5000 false Bd3: 13355509-13360508 Brachypodium distachyon
Bradi3g15050 10.0kb upstream 10.0kb upstream 18727 true Bd3: 13336782-13355508 Brachypodium distachyon
Bradi3g15050 10.0kb upstream 10.0kb upstream 10000 false Bd3: 13336782-13346781 Brachypodium distachyon
Bradi3g15050 10.0kb downstream 10.0kb downstream 18727 true Bd3: 13346782-13365508 Brachypodium distachyon
Bradi3g15050 10.0kb downstream 10.0kb downstream 10000 false Bd3: 13355509-13365508 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124578353 5269 Grass View MSA
122043810 5273 Angiosperm View MSA
121344247 5274 Embryophyte View MSA
123428745 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 43.732     High  
cufflinks 48.596     High  
cufflinks 49.202     High  
cufflinks 39.982     High  
cufflinks 33.323     High  
cufflinks 49.25     High  
cufflinks 41.961     High  
cufflinks 44.393     High  
cufflinks 50.38     High  
cufflinks 25.996     High Low
cufflinks 50.473     High  
cufflinks 58.274     High  
cufflinks 41.761     High  
cufflinks 36.951     High  
cufflinks 40.981     High  
cufflinks 53.752     High  
cufflinks 35.896     High  
cufflinks 118.916     High High
cufflinks 61.466     High High
cufflinks 33.82     High  
cufflinks 39.601     High  
cufflinks 49.065     High  
cufflinks 45.131     High  
cufflinks 43.562     High  
cufflinks 34.317     High  
cufflinks 40.544     High  
cufflinks 38.055     High  
cufflinks 35.172     High  
cufflinks 36.09     High  
cufflinks 54.513     High  

0 Strain