Gene : Bradi3g15080 B. distachyon v3.1
Genomic Order:  1879 Name:  ? Bradi3g15080
Secondary Identifier:  ? PAC:32818592
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g15080 0.5kb upstream 0.5kb upstream 4095 true Bd3: 13392589-13396683 Brachypodium distachyon
Bradi3g15080 0.5kb upstream 0.5kb upstream 500 false Bd3: 13392589-13393088 Brachypodium distachyon
Bradi3g15080 0.5kb downstream 0.5kb downstream 4095 true Bd3: 13393089-13397183 Brachypodium distachyon
Bradi3g15080 0.5kb downstream 0.5kb downstream 500 false Bd3: 13396684-13397183 Brachypodium distachyon
Bradi3g15080 1.0kb upstream 1.0kb upstream 4595 true Bd3: 13392089-13396683 Brachypodium distachyon
Bradi3g15080 1.0kb upstream 1.0kb upstream 1000 false Bd3: 13392089-13393088 Brachypodium distachyon
Bradi3g15080 1.0kb downstream 1.0kb downstream 4595 true Bd3: 13393089-13397683 Brachypodium distachyon
Bradi3g15080 1.0kb downstream 1.0kb downstream 1000 false Bd3: 13396684-13397683 Brachypodium distachyon
Bradi3g15080 2.0kb upstream 2.0kb upstream 5595 true Bd3: 13391089-13396683 Brachypodium distachyon
Bradi3g15080 2.0kb upstream 2.0kb upstream 2000 false Bd3: 13391089-13393088 Brachypodium distachyon
Bradi3g15080 2.0kb downstream 2.0kb downstream 5595 true Bd3: 13393089-13398683 Brachypodium distachyon
Bradi3g15080 2.0kb downstream 2.0kb downstream 2000 false Bd3: 13396684-13398683 Brachypodium distachyon
Bradi3g15080 5.0kb upstream 5.0kb upstream 8595 true Bd3: 13388089-13396683 Brachypodium distachyon
Bradi3g15080 5.0kb upstream 5.0kb upstream 5000 false Bd3: 13388089-13393088 Brachypodium distachyon
Bradi3g15080 5.0kb downstream 5.0kb downstream 8595 true Bd3: 13393089-13401683 Brachypodium distachyon
Bradi3g15080 5.0kb downstream 5.0kb downstream 5000 false Bd3: 13396684-13401683 Brachypodium distachyon
Bradi3g15080 10.0kb upstream 10.0kb upstream 13595 true Bd3: 13383089-13396683 Brachypodium distachyon
Bradi3g15080 10.0kb upstream 10.0kb upstream 10000 false Bd3: 13383089-13393088 Brachypodium distachyon
Bradi3g15080 10.0kb downstream 10.0kb downstream 13595 true Bd3: 13393089-13406683 Brachypodium distachyon
Bradi3g15080 10.0kb downstream 10.0kb downstream 10000 false Bd3: 13396684-13406683 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124473004 5269 Grass Singleton cluster - no MSA
122047406 5273 Angiosperm View MSA
121310736 5274 Embryophyte View MSA
123348149 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.022     Low  
cufflinks 0.02     Low  
cufflinks 0.032     Low  
cufflinks 0.023     Low  
cufflinks 0.041     Low  
cufflinks 0.013     Low  
cufflinks 0.023     Low  
cufflinks 0.007     Low Low
cufflinks 0.014     Low  
cufflinks 0.049     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.02     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.023     Low  
cufflinks 0.023     Low  
cufflinks 0.069     Low High
cufflinks 0.006     Low Low
cufflinks 0.009     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.214       High
cufflinks 0.017     Low  
cufflinks 0.029     Low  
cufflinks 0.011     Low  
cufflinks 0.008     Low Low
cufflinks 0.018     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.023     Low  
cufflinks 0.022     Low  
cufflinks 0.059     Low High

0 Strain