Gene : Bradi3g15590 B. distachyon v3.1
Defline:  (1 of 1) PTHR22952//PTHR22952:SF160 - CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED // SUBFAMILY NOT NAMED Genomic Order:  1946
Name:  ? Bradi3g15590 Secondary Identifier:  ? PAC:32814744
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g15590 0.5kb upstream 0.5kb upstream 6115 true Bd3: 13868555-13874669 Brachypodium distachyon
Bradi3g15590 0.5kb upstream 0.5kb upstream 500 false Bd3: 13868555-13869054 Brachypodium distachyon
Bradi3g15590 0.5kb downstream 0.5kb downstream 6115 true Bd3: 13869055-13875169 Brachypodium distachyon
Bradi3g15590 0.5kb downstream 0.5kb downstream 500 false Bd3: 13874670-13875169 Brachypodium distachyon
Bradi3g15590 1.0kb upstream 1.0kb upstream 6615 true Bd3: 13868055-13874669 Brachypodium distachyon
Bradi3g15590 1.0kb upstream 1.0kb upstream 1000 false Bd3: 13868055-13869054 Brachypodium distachyon
Bradi3g15590 1.0kb downstream 1.0kb downstream 6615 true Bd3: 13869055-13875669 Brachypodium distachyon
Bradi3g15590 1.0kb downstream 1.0kb downstream 1000 false Bd3: 13874670-13875669 Brachypodium distachyon
Bradi3g15590 2.0kb upstream 2.0kb upstream 7615 true Bd3: 13867055-13874669 Brachypodium distachyon
Bradi3g15590 2.0kb upstream 2.0kb upstream 2000 false Bd3: 13867055-13869054 Brachypodium distachyon
Bradi3g15590 2.0kb downstream 2.0kb downstream 7615 true Bd3: 13869055-13876669 Brachypodium distachyon
Bradi3g15590 2.0kb downstream 2.0kb downstream 2000 false Bd3: 13874670-13876669 Brachypodium distachyon
Bradi3g15590 5.0kb upstream 5.0kb upstream 10615 true Bd3: 13864055-13874669 Brachypodium distachyon
Bradi3g15590 5.0kb upstream 5.0kb upstream 5000 false Bd3: 13864055-13869054 Brachypodium distachyon
Bradi3g15590 5.0kb downstream 5.0kb downstream 10615 true Bd3: 13869055-13879669 Brachypodium distachyon
Bradi3g15590 5.0kb downstream 5.0kb downstream 5000 false Bd3: 13874670-13879669 Brachypodium distachyon
Bradi3g15590 10.0kb upstream 10.0kb upstream 15615 true Bd3: 13859055-13874669 Brachypodium distachyon
Bradi3g15590 10.0kb upstream 10.0kb upstream 10000 false Bd3: 13859055-13869054 Brachypodium distachyon
Bradi3g15590 10.0kb downstream 10.0kb downstream 15615 true Bd3: 13869055-13884669 Brachypodium distachyon
Bradi3g15590 10.0kb downstream 10.0kb downstream 10000 false Bd3: 13874670-13884669 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124572700 5269 Grass View MSA
122045464 5273 Angiosperm View MSA
121310452 5274 Embryophyte View MSA
123347930 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.294        
cufflinks 0.873        
cufflinks 1.343        
cufflinks 1.395        
cufflinks 1.872        
cufflinks 0.705       Low
cufflinks 0.995        
cufflinks 1.157        
cufflinks 0.907        
cufflinks 1.861        
cufflinks 0.937        
cufflinks 0.499       Low
cufflinks 0.802        
cufflinks 0.7       Low
cufflinks 0.912        
cufflinks 0.779        
cufflinks 1.579        
cufflinks 1.613        
cufflinks 3.946       High
cufflinks 2.671       High
cufflinks 1.406        
cufflinks 1.047        
cufflinks 1.488        
cufflinks 0.873        
cufflinks 0.83        
cufflinks 1.123        
cufflinks 1.258        
cufflinks 1.866        
cufflinks 1.36        
cufflinks 0.951        

0 Strain