Gene : Bradi3g16290 B. distachyon v3.1
Defline:  (1 of 1) PTHR13156 - NADH-UBIQUINONE OXIDOREDUCTASE 13 KD-A SUBUNIT Genomic Order:  2052
Name:  ? Bradi3g16290 Secondary Identifier:  ? PAC:32813959
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g16290 0.5kb upstream 0.5kb upstream 3857 true Bd3: 14456328-14460184 Brachypodium distachyon
Bradi3g16290 0.5kb upstream 0.5kb upstream 500 false Bd3: 14459685-14460184 Brachypodium distachyon
Bradi3g16290 0.5kb downstream 0.5kb downstream 3857 true Bd3: 14455828-14459684 Brachypodium distachyon
Bradi3g16290 0.5kb downstream 0.5kb downstream 500 false Bd3: 14455828-14456327 Brachypodium distachyon
Bradi3g16290 1.0kb upstream 1.0kb upstream 4357 true Bd3: 14456328-14460684 Brachypodium distachyon
Bradi3g16290 1.0kb upstream 1.0kb upstream 1000 false Bd3: 14459685-14460684 Brachypodium distachyon
Bradi3g16290 1.0kb downstream 1.0kb downstream 4357 true Bd3: 14455328-14459684 Brachypodium distachyon
Bradi3g16290 1.0kb downstream 1.0kb downstream 1000 false Bd3: 14455328-14456327 Brachypodium distachyon
Bradi3g16290 2.0kb upstream 2.0kb upstream 5357 true Bd3: 14456328-14461684 Brachypodium distachyon
Bradi3g16290 2.0kb upstream 2.0kb upstream 2000 false Bd3: 14459685-14461684 Brachypodium distachyon
Bradi3g16290 2.0kb downstream 2.0kb downstream 5357 true Bd3: 14454328-14459684 Brachypodium distachyon
Bradi3g16290 2.0kb downstream 2.0kb downstream 2000 false Bd3: 14454328-14456327 Brachypodium distachyon
Bradi3g16290 5.0kb upstream 5.0kb upstream 8357 true Bd3: 14456328-14464684 Brachypodium distachyon
Bradi3g16290 5.0kb upstream 5.0kb upstream 5000 false Bd3: 14459685-14464684 Brachypodium distachyon
Bradi3g16290 5.0kb downstream 5.0kb downstream 8357 true Bd3: 14451328-14459684 Brachypodium distachyon
Bradi3g16290 5.0kb downstream 5.0kb downstream 5000 false Bd3: 14451328-14456327 Brachypodium distachyon
Bradi3g16290 10.0kb upstream 10.0kb upstream 13357 true Bd3: 14456328-14469684 Brachypodium distachyon
Bradi3g16290 10.0kb upstream 10.0kb upstream 10000 false Bd3: 14459685-14469684 Brachypodium distachyon
Bradi3g16290 10.0kb downstream 10.0kb downstream 13357 true Bd3: 14446328-14459684 Brachypodium distachyon
Bradi3g16290 10.0kb downstream 10.0kb downstream 10000 false Bd3: 14446328-14456327 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124574977 5269 Grass View MSA
122043050 5273 Angiosperm View MSA
121344521 5274 Embryophyte View MSA
123424035 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.35     High  
cufflinks 9.346        
cufflinks 8.751        
cufflinks 12.523     High  
cufflinks 10.259     High  
cufflinks 8.366        
cufflinks 9.595     High  
cufflinks 8.18        
cufflinks 7.843        
cufflinks 15.63     High High
cufflinks 5.537       Low
cufflinks 6.245       Low
cufflinks 5.735       Low
cufflinks 6.114       Low
cufflinks 7.84        
cufflinks 8.575        
cufflinks 15.039     High High
cufflinks 16.411     High High
cufflinks 11.524        
cufflinks 12.522     High  
cufflinks 19.434     High High
cufflinks 7.887        
cufflinks 8.063        
cufflinks 9.849     High  
cufflinks 11.589     High  
cufflinks 13.551     High  
cufflinks 4.724       Low
cufflinks 12.046     High  
cufflinks 10.205        
cufflinks 12.745     High  

0 Strain