Gene : Bradi3g16192 B. distachyon v3.1
Defline:  (1 of 1) PF03980 - Nnf1 (Nnf1) Genomic Order:  2040
Name:  ? Bradi3g16192 Secondary Identifier:  ? PAC:32812271
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g16192 0.5kb upstream 0.5kb upstream 3320 true Bd3: 14360468-14363787 Brachypodium distachyon
Bradi3g16192 0.5kb upstream 0.5kb upstream 500 false Bd3: 14363288-14363787 Brachypodium distachyon
Bradi3g16192 0.5kb downstream 0.5kb downstream 3320 true Bd3: 14359968-14363287 Brachypodium distachyon
Bradi3g16192 0.5kb downstream 0.5kb downstream 500 false Bd3: 14359968-14360467 Brachypodium distachyon
Bradi3g16192 1.0kb upstream 1.0kb upstream 3820 true Bd3: 14360468-14364287 Brachypodium distachyon
Bradi3g16192 1.0kb upstream 1.0kb upstream 1000 false Bd3: 14363288-14364287 Brachypodium distachyon
Bradi3g16192 1.0kb downstream 1.0kb downstream 3820 true Bd3: 14359468-14363287 Brachypodium distachyon
Bradi3g16192 1.0kb downstream 1.0kb downstream 1000 false Bd3: 14359468-14360467 Brachypodium distachyon
Bradi3g16192 2.0kb upstream 2.0kb upstream 4820 true Bd3: 14360468-14365287 Brachypodium distachyon
Bradi3g16192 2.0kb upstream 2.0kb upstream 2000 false Bd3: 14363288-14365287 Brachypodium distachyon
Bradi3g16192 2.0kb downstream 2.0kb downstream 4820 true Bd3: 14358468-14363287 Brachypodium distachyon
Bradi3g16192 2.0kb downstream 2.0kb downstream 2000 false Bd3: 14358468-14360467 Brachypodium distachyon
Bradi3g16192 5.0kb upstream 5.0kb upstream 7820 true Bd3: 14360468-14368287 Brachypodium distachyon
Bradi3g16192 5.0kb upstream 5.0kb upstream 5000 false Bd3: 14363288-14368287 Brachypodium distachyon
Bradi3g16192 5.0kb downstream 5.0kb downstream 7820 true Bd3: 14355468-14363287 Brachypodium distachyon
Bradi3g16192 5.0kb downstream 5.0kb downstream 5000 false Bd3: 14355468-14360467 Brachypodium distachyon
Bradi3g16192 10.0kb upstream 10.0kb upstream 12820 true Bd3: 14360468-14373287 Brachypodium distachyon
Bradi3g16192 10.0kb upstream 10.0kb upstream 10000 false Bd3: 14363288-14373287 Brachypodium distachyon
Bradi3g16192 10.0kb downstream 10.0kb downstream 12820 true Bd3: 14350468-14363287 Brachypodium distachyon
Bradi3g16192 10.0kb downstream 10.0kb downstream 10000 false Bd3: 14350468-14360467 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026231 5273 Angiosperm View MSA
124581969 5269 Grass View MSA
121344931 5274 Embryophyte View MSA
123380130 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.159        
cufflinks 2.134        
cufflinks 2.271        
cufflinks 2.71        
cufflinks 2.628        
cufflinks 1.96        
cufflinks 2.165        
cufflinks 2.386        
cufflinks 1.939        
cufflinks 3.341       High
cufflinks 0.6       Low
cufflinks 1.393        
cufflinks 0.657       Low
cufflinks 0.725       Low
cufflinks 1.02       Low
cufflinks 1.848        
cufflinks 3.669       High
cufflinks 2.302        
cufflinks 3.659       High
cufflinks 1.023       Low
cufflinks 2.047        
cufflinks 2.353        
cufflinks 2.014        
cufflinks 1.694        
cufflinks 2.438        
cufflinks 3.185       High
cufflinks 0.937       Low
cufflinks 2.917        
cufflinks 2.389        
cufflinks 2.658        

0 Strain