Gene : Bradi3g16160 B. distachyon v3.1
Defline:  (1 of 1) PTHR11785:SF338 - POLYAMINE TRANSPORTER RMV1 Genomic Order:  2035
Name:  ? Bradi3g16160 Secondary Identifier:  ? PAC:32817665
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g16160 0.5kb upstream 0.5kb upstream 4121 true Bd3: 14334825-14338945 Brachypodium distachyon
Bradi3g16160 0.5kb upstream 0.5kb upstream 500 false Bd3: 14338446-14338945 Brachypodium distachyon
Bradi3g16160 0.5kb downstream 0.5kb downstream 4121 true Bd3: 14334325-14338445 Brachypodium distachyon
Bradi3g16160 0.5kb downstream 0.5kb downstream 500 false Bd3: 14334325-14334824 Brachypodium distachyon
Bradi3g16160 1.0kb upstream 1.0kb upstream 4621 true Bd3: 14334825-14339445 Brachypodium distachyon
Bradi3g16160 1.0kb upstream 1.0kb upstream 1000 false Bd3: 14338446-14339445 Brachypodium distachyon
Bradi3g16160 1.0kb downstream 1.0kb downstream 4621 true Bd3: 14333825-14338445 Brachypodium distachyon
Bradi3g16160 1.0kb downstream 1.0kb downstream 1000 false Bd3: 14333825-14334824 Brachypodium distachyon
Bradi3g16160 2.0kb upstream 2.0kb upstream 5621 true Bd3: 14334825-14340445 Brachypodium distachyon
Bradi3g16160 2.0kb upstream 2.0kb upstream 2000 false Bd3: 14338446-14340445 Brachypodium distachyon
Bradi3g16160 2.0kb downstream 2.0kb downstream 5621 true Bd3: 14332825-14338445 Brachypodium distachyon
Bradi3g16160 2.0kb downstream 2.0kb downstream 2000 false Bd3: 14332825-14334824 Brachypodium distachyon
Bradi3g16160 5.0kb upstream 5.0kb upstream 8621 true Bd3: 14334825-14343445 Brachypodium distachyon
Bradi3g16160 5.0kb upstream 5.0kb upstream 5000 false Bd3: 14338446-14343445 Brachypodium distachyon
Bradi3g16160 5.0kb downstream 5.0kb downstream 8621 true Bd3: 14329825-14338445 Brachypodium distachyon
Bradi3g16160 5.0kb downstream 5.0kb downstream 5000 false Bd3: 14329825-14334824 Brachypodium distachyon
Bradi3g16160 10.0kb upstream 10.0kb upstream 13621 true Bd3: 14334825-14348445 Brachypodium distachyon
Bradi3g16160 10.0kb upstream 10.0kb upstream 10000 false Bd3: 14338446-14348445 Brachypodium distachyon
Bradi3g16160 10.0kb downstream 10.0kb downstream 13621 true Bd3: 14324825-14338445 Brachypodium distachyon
Bradi3g16160 10.0kb downstream 10.0kb downstream 10000 false Bd3: 14324825-14334824 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124570310 5269 Grass View MSA
122043396 5273 Angiosperm View MSA
121345389 5274 Embryophyte View MSA
123424636 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.616        
cufflinks 3.735        
cufflinks 4.189        
cufflinks 3.34        
cufflinks 2.399        
cufflinks 3.54        
cufflinks 3.951        
cufflinks 3.864        
cufflinks 3.65        
cufflinks 2.4        
cufflinks 1.312       Low
cufflinks 3.665        
cufflinks 1.733        
cufflinks 1.502       Low
cufflinks 3.088        
cufflinks 3.788        
cufflinks 3.285        
cufflinks 7.504       High
cufflinks 2.405        
cufflinks 0.164       Low
cufflinks 5.676       High
cufflinks 3.379        
cufflinks 3.504        
cufflinks 3.54        
cufflinks 2.946        
cufflinks 3.662        
cufflinks 1.944        
cufflinks 3.121        
cufflinks 3.567        
cufflinks 6.823       High

0 Strain