Gene : Bradi3g16350 B. distachyon v3.1
Defline:  (1 of 2) K13176 - THO complex subunit 7 (THOC7) Genomic Order:  2059
Name:  ? Bradi3g16350 Secondary Identifier:  ? PAC:32813823
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g16350 0.5kb upstream 0.5kb upstream 3157 true Bd3: 14573979-14577135 Brachypodium distachyon
Bradi3g16350 0.5kb upstream 0.5kb upstream 500 false Bd3: 14573979-14574478 Brachypodium distachyon
Bradi3g16350 0.5kb downstream 0.5kb downstream 3157 true Bd3: 14574479-14577635 Brachypodium distachyon
Bradi3g16350 0.5kb downstream 0.5kb downstream 500 false Bd3: 14577136-14577635 Brachypodium distachyon
Bradi3g16350 1.0kb upstream 1.0kb upstream 3657 true Bd3: 14573479-14577135 Brachypodium distachyon
Bradi3g16350 1.0kb upstream 1.0kb upstream 1000 false Bd3: 14573479-14574478 Brachypodium distachyon
Bradi3g16350 1.0kb downstream 1.0kb downstream 3657 true Bd3: 14574479-14578135 Brachypodium distachyon
Bradi3g16350 1.0kb downstream 1.0kb downstream 1000 false Bd3: 14577136-14578135 Brachypodium distachyon
Bradi3g16350 2.0kb upstream 2.0kb upstream 4657 true Bd3: 14572479-14577135 Brachypodium distachyon
Bradi3g16350 2.0kb upstream 2.0kb upstream 2000 false Bd3: 14572479-14574478 Brachypodium distachyon
Bradi3g16350 2.0kb downstream 2.0kb downstream 4657 true Bd3: 14574479-14579135 Brachypodium distachyon
Bradi3g16350 2.0kb downstream 2.0kb downstream 2000 false Bd3: 14577136-14579135 Brachypodium distachyon
Bradi3g16350 5.0kb upstream 5.0kb upstream 7657 true Bd3: 14569479-14577135 Brachypodium distachyon
Bradi3g16350 5.0kb upstream 5.0kb upstream 5000 false Bd3: 14569479-14574478 Brachypodium distachyon
Bradi3g16350 5.0kb downstream 5.0kb downstream 7657 true Bd3: 14574479-14582135 Brachypodium distachyon
Bradi3g16350 5.0kb downstream 5.0kb downstream 5000 false Bd3: 14577136-14582135 Brachypodium distachyon
Bradi3g16350 10.0kb upstream 10.0kb upstream 12657 true Bd3: 14564479-14577135 Brachypodium distachyon
Bradi3g16350 10.0kb upstream 10.0kb upstream 10000 false Bd3: 14564479-14574478 Brachypodium distachyon
Bradi3g16350 10.0kb downstream 10.0kb downstream 12657 true Bd3: 14574479-14587135 Brachypodium distachyon
Bradi3g16350 10.0kb downstream 10.0kb downstream 10000 false Bd3: 14577136-14587135 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124580384 5269 Grass View MSA
122047726 5273 Angiosperm View MSA
121351339 5274 Embryophyte View MSA
123428544 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.346        
cufflinks 1.665        
cufflinks 1.753        
cufflinks 1.49        
cufflinks 1.335        
cufflinks 1.713        
cufflinks 1.698        
cufflinks 1.543        
cufflinks 1.616        
cufflinks 1.496        
cufflinks 1.496        
cufflinks 1.477        
cufflinks 1.077       Low
cufflinks 1.178       Low
cufflinks 1.583        
cufflinks 1.768        
cufflinks 1.859        
cufflinks 2.738       High
cufflinks 1.391        
cufflinks 1.188       Low
cufflinks 2.195       High
cufflinks 1.569        
cufflinks 1.572        
cufflinks 1.481        
cufflinks 1.602        
cufflinks 1.753        
cufflinks 1.385        
cufflinks 1.751        
cufflinks 1.656        
cufflinks 2.095       High

0 Strain