Gene : Bradi4g39695 B. distachyon v3.1
Defline:  (1 of 1) PTHR23089:SF7 - HIT FAMILY PROTEIN 1 Genomic Order:  5110
Name:  ? Bradi4g39695 Secondary Identifier:  ? PAC:32784267
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g39695 0.5kb upstream 0.5kb upstream 7597 true Bd4: 44271669-44279265 Brachypodium distachyon
Bradi4g39695 0.5kb upstream 0.5kb upstream 500 false Bd4: 44278766-44279265 Brachypodium distachyon
Bradi4g39695 0.5kb downstream 0.5kb downstream 7597 true Bd4: 44271169-44278765 Brachypodium distachyon
Bradi4g39695 0.5kb downstream 0.5kb downstream 500 false Bd4: 44271169-44271668 Brachypodium distachyon
Bradi4g39695 1.0kb upstream 1.0kb upstream 8097 true Bd4: 44271669-44279765 Brachypodium distachyon
Bradi4g39695 1.0kb upstream 1.0kb upstream 1000 false Bd4: 44278766-44279765 Brachypodium distachyon
Bradi4g39695 1.0kb downstream 1.0kb downstream 8097 true Bd4: 44270669-44278765 Brachypodium distachyon
Bradi4g39695 1.0kb downstream 1.0kb downstream 1000 false Bd4: 44270669-44271668 Brachypodium distachyon
Bradi4g39695 2.0kb upstream 2.0kb upstream 9097 true Bd4: 44271669-44280765 Brachypodium distachyon
Bradi4g39695 2.0kb upstream 2.0kb upstream 2000 false Bd4: 44278766-44280765 Brachypodium distachyon
Bradi4g39695 2.0kb downstream 2.0kb downstream 9097 true Bd4: 44269669-44278765 Brachypodium distachyon
Bradi4g39695 2.0kb downstream 2.0kb downstream 2000 false Bd4: 44269669-44271668 Brachypodium distachyon
Bradi4g39695 5.0kb upstream 5.0kb upstream 12097 true Bd4: 44271669-44283765 Brachypodium distachyon
Bradi4g39695 5.0kb upstream 5.0kb upstream 5000 false Bd4: 44278766-44283765 Brachypodium distachyon
Bradi4g39695 5.0kb downstream 5.0kb downstream 12097 true Bd4: 44266669-44278765 Brachypodium distachyon
Bradi4g39695 5.0kb downstream 5.0kb downstream 5000 false Bd4: 44266669-44271668 Brachypodium distachyon
Bradi4g39695 10.0kb upstream 10.0kb upstream 17097 true Bd4: 44271669-44288765 Brachypodium distachyon
Bradi4g39695 10.0kb upstream 10.0kb upstream 10000 false Bd4: 44278766-44288765 Brachypodium distachyon
Bradi4g39695 10.0kb downstream 10.0kb downstream 17097 true Bd4: 44261669-44278765 Brachypodium distachyon
Bradi4g39695 10.0kb downstream 10.0kb downstream 10000 false Bd4: 44261669-44271668 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124579105 5269 Grass View MSA
122049116 5273 Angiosperm View MSA
121311254 5274 Embryophyte View MSA
123425482 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.423       High
cufflinks 1.315        
cufflinks 1.463        
cufflinks 1.662        
cufflinks 0.698       Low
cufflinks 1.358        
cufflinks 1.145        
cufflinks 1.77        
cufflinks 1.534        
cufflinks 1.775        
cufflinks 2.141        
cufflinks 1.454        
cufflinks 1.806        
cufflinks 2.146        
cufflinks 2.663       High
cufflinks 1.277        
cufflinks 1.292        
cufflinks 0.467       Low
cufflinks 0.797       Low
cufflinks 0.569       Low
cufflinks 1.166        
cufflinks 1.74        
cufflinks 1.612        
cufflinks 1.651        
cufflinks 1.565        
cufflinks 1.711        
cufflinks 2.761       High
cufflinks 1.874        
cufflinks 1.65        
cufflinks 0.744       Low

0 Strain