Gene : Bradi3g16890 B. distachyon v3.1
Defline:  (1 of 1) PTHR10972//PTHR10972:SF84 - OXYSTEROL-BINDING PROTEIN-RELATED // SUBFAMILY NOT NAMED Genomic Order:  2122
Name:  ? Bradi3g16890 Secondary Identifier:  ? PAC:32819056
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g16890 0.5kb upstream 0.5kb upstream 7401 true Bd3: 15064600-15072000 Brachypodium distachyon
Bradi3g16890 0.5kb upstream 0.5kb upstream 500 false Bd3: 15071501-15072000 Brachypodium distachyon
Bradi3g16890 0.5kb downstream 0.5kb downstream 7401 true Bd3: 15064100-15071500 Brachypodium distachyon
Bradi3g16890 0.5kb downstream 0.5kb downstream 500 false Bd3: 15064100-15064599 Brachypodium distachyon
Bradi3g16890 1.0kb upstream 1.0kb upstream 7901 true Bd3: 15064600-15072500 Brachypodium distachyon
Bradi3g16890 1.0kb upstream 1.0kb upstream 1000 false Bd3: 15071501-15072500 Brachypodium distachyon
Bradi3g16890 1.0kb downstream 1.0kb downstream 7901 true Bd3: 15063600-15071500 Brachypodium distachyon
Bradi3g16890 1.0kb downstream 1.0kb downstream 1000 false Bd3: 15063600-15064599 Brachypodium distachyon
Bradi3g16890 2.0kb upstream 2.0kb upstream 8901 true Bd3: 15064600-15073500 Brachypodium distachyon
Bradi3g16890 2.0kb upstream 2.0kb upstream 2000 false Bd3: 15071501-15073500 Brachypodium distachyon
Bradi3g16890 2.0kb downstream 2.0kb downstream 8901 true Bd3: 15062600-15071500 Brachypodium distachyon
Bradi3g16890 2.0kb downstream 2.0kb downstream 2000 false Bd3: 15062600-15064599 Brachypodium distachyon
Bradi3g16890 5.0kb upstream 5.0kb upstream 11901 true Bd3: 15064600-15076500 Brachypodium distachyon
Bradi3g16890 5.0kb upstream 5.0kb upstream 5000 false Bd3: 15071501-15076500 Brachypodium distachyon
Bradi3g16890 5.0kb downstream 5.0kb downstream 11901 true Bd3: 15059600-15071500 Brachypodium distachyon
Bradi3g16890 5.0kb downstream 5.0kb downstream 5000 false Bd3: 15059600-15064599 Brachypodium distachyon
Bradi3g16890 10.0kb upstream 10.0kb upstream 16901 true Bd3: 15064600-15081500 Brachypodium distachyon
Bradi3g16890 10.0kb upstream 10.0kb upstream 10000 false Bd3: 15071501-15081500 Brachypodium distachyon
Bradi3g16890 10.0kb downstream 10.0kb downstream 16901 true Bd3: 15054600-15071500 Brachypodium distachyon
Bradi3g16890 10.0kb downstream 10.0kb downstream 10000 false Bd3: 15054600-15064599 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124588741 5269 Grass View MSA
122049875 5273 Angiosperm View MSA
121348074 5274 Embryophyte View MSA
123428535 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.252        
cufflinks 0.219        
cufflinks 0.241        
cufflinks 0.202        
cufflinks 0.132       Low
cufflinks 0.2        
cufflinks 0.139       Low
cufflinks 0.193        
cufflinks 0.206        
cufflinks 0.238        
cufflinks 0.154        
cufflinks 0.256        
cufflinks 0.166        
cufflinks 0.119       Low
cufflinks 0.265        
cufflinks 0.215        
cufflinks 0.197        
cufflinks 0.429       High
cufflinks 0.303       High
cufflinks 0.099     Low Low
cufflinks 0.286       High
cufflinks 0.293       High
cufflinks 0.194        
cufflinks 0.18        
cufflinks 0.162        
cufflinks 0.256        
cufflinks 0.207        
cufflinks 0.232        
cufflinks 0.258        
cufflinks 0.339       High

0 Strain