Gene : Bradi3g16927 B. distachyon v3.1
Defline:  (1 of 2) 2.2.1.2 - Transaldolase / Glycerone transferase Genomic Order:  2126
Name:  ? Bradi3g16927 Secondary Identifier:  ? PAC:32816585
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon NONOXIPENT-PWY Brachypodium distachyon pathologic  
Bdistachyon PENTOSE-P-PWY Brachypodium distachyon pathologic  
Bdistachyon PWY-5723 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g16927 0.5kb upstream 0.5kb upstream 5932 true Bd3: 15109771-15115702 Brachypodium distachyon
Bradi3g16927 0.5kb upstream 0.5kb upstream 500 false Bd3: 15109771-15110270 Brachypodium distachyon
Bradi3g16927 0.5kb downstream 0.5kb downstream 5932 true Bd3: 15110271-15116202 Brachypodium distachyon
Bradi3g16927 0.5kb downstream 0.5kb downstream 500 false Bd3: 15115703-15116202 Brachypodium distachyon
Bradi3g16927 1.0kb upstream 1.0kb upstream 6432 true Bd3: 15109271-15115702 Brachypodium distachyon
Bradi3g16927 1.0kb upstream 1.0kb upstream 1000 false Bd3: 15109271-15110270 Brachypodium distachyon
Bradi3g16927 1.0kb downstream 1.0kb downstream 6432 true Bd3: 15110271-15116702 Brachypodium distachyon
Bradi3g16927 1.0kb downstream 1.0kb downstream 1000 false Bd3: 15115703-15116702 Brachypodium distachyon
Bradi3g16927 2.0kb upstream 2.0kb upstream 7432 true Bd3: 15108271-15115702 Brachypodium distachyon
Bradi3g16927 2.0kb upstream 2.0kb upstream 2000 false Bd3: 15108271-15110270 Brachypodium distachyon
Bradi3g16927 2.0kb downstream 2.0kb downstream 7432 true Bd3: 15110271-15117702 Brachypodium distachyon
Bradi3g16927 2.0kb downstream 2.0kb downstream 2000 false Bd3: 15115703-15117702 Brachypodium distachyon
Bradi3g16927 5.0kb upstream 5.0kb upstream 10432 true Bd3: 15105271-15115702 Brachypodium distachyon
Bradi3g16927 5.0kb upstream 5.0kb upstream 5000 false Bd3: 15105271-15110270 Brachypodium distachyon
Bradi3g16927 5.0kb downstream 5.0kb downstream 10432 true Bd3: 15110271-15120702 Brachypodium distachyon
Bradi3g16927 5.0kb downstream 5.0kb downstream 5000 false Bd3: 15115703-15120702 Brachypodium distachyon
Bradi3g16927 10.0kb upstream 10.0kb upstream 15432 true Bd3: 15100271-15115702 Brachypodium distachyon
Bradi3g16927 10.0kb upstream 10.0kb upstream 10000 false Bd3: 15100271-15110270 Brachypodium distachyon
Bradi3g16927 10.0kb downstream 10.0kb downstream 15432 true Bd3: 15110271-15125702 Brachypodium distachyon
Bradi3g16927 10.0kb downstream 10.0kb downstream 10000 false Bd3: 15115703-15125702 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124569843 5269 Grass View MSA
122043979 5273 Angiosperm View MSA
121346789 5274 Embryophyte View MSA
123424119 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.959        
cufflinks 6.91        
cufflinks 6.866        
cufflinks 6.166        
cufflinks 5.408        
cufflinks 7.403        
cufflinks 7.398        
cufflinks 7.769        
cufflinks 6.886        
cufflinks 8.987        
cufflinks 0.588       Low
cufflinks 5.387        
cufflinks 2.461        
cufflinks 0.655       Low
cufflinks 2.509        
cufflinks 6.934        
cufflinks 6.204        
cufflinks 18.873     High High
cufflinks 9.342        
cufflinks 5.329        
cufflinks 8.634        
cufflinks 9.8        
cufflinks 7.18        
cufflinks 6.334        
cufflinks 5.974        
cufflinks 7.087        
cufflinks 1.686       Low
cufflinks 7.792        
cufflinks 7.659        
cufflinks 8.911        

0 Strain