Gene : Bradi3g17120 B. distachyon v3.1
Defline:  (1 of 1) PTHR22912:SF97 - MONODEHYDROASCORBATE REDUCTASE, CHLOROPLASTIC Genomic Order:  2148
Name:  ? Bradi3g17120 Secondary Identifier:  ? PAC:32813468
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g17120 0.5kb upstream 0.5kb upstream 4883 true Bd3: 15245879-15250761 Brachypodium distachyon
Bradi3g17120 0.5kb upstream 0.5kb upstream 500 false Bd3: 15250262-15250761 Brachypodium distachyon
Bradi3g17120 0.5kb downstream 0.5kb downstream 4883 true Bd3: 15245379-15250261 Brachypodium distachyon
Bradi3g17120 0.5kb downstream 0.5kb downstream 500 false Bd3: 15245379-15245878 Brachypodium distachyon
Bradi3g17120 1.0kb upstream 1.0kb upstream 5383 true Bd3: 15245879-15251261 Brachypodium distachyon
Bradi3g17120 1.0kb upstream 1.0kb upstream 1000 false Bd3: 15250262-15251261 Brachypodium distachyon
Bradi3g17120 1.0kb downstream 1.0kb downstream 5383 true Bd3: 15244879-15250261 Brachypodium distachyon
Bradi3g17120 1.0kb downstream 1.0kb downstream 1000 false Bd3: 15244879-15245878 Brachypodium distachyon
Bradi3g17120 2.0kb upstream 2.0kb upstream 6383 true Bd3: 15245879-15252261 Brachypodium distachyon
Bradi3g17120 2.0kb upstream 2.0kb upstream 2000 false Bd3: 15250262-15252261 Brachypodium distachyon
Bradi3g17120 2.0kb downstream 2.0kb downstream 6383 true Bd3: 15243879-15250261 Brachypodium distachyon
Bradi3g17120 2.0kb downstream 2.0kb downstream 2000 false Bd3: 15243879-15245878 Brachypodium distachyon
Bradi3g17120 5.0kb upstream 5.0kb upstream 9383 true Bd3: 15245879-15255261 Brachypodium distachyon
Bradi3g17120 5.0kb upstream 5.0kb upstream 5000 false Bd3: 15250262-15255261 Brachypodium distachyon
Bradi3g17120 5.0kb downstream 5.0kb downstream 9383 true Bd3: 15240879-15250261 Brachypodium distachyon
Bradi3g17120 5.0kb downstream 5.0kb downstream 5000 false Bd3: 15240879-15245878 Brachypodium distachyon
Bradi3g17120 10.0kb upstream 10.0kb upstream 14383 true Bd3: 15245879-15260261 Brachypodium distachyon
Bradi3g17120 10.0kb upstream 10.0kb upstream 10000 false Bd3: 15250262-15260261 Brachypodium distachyon
Bradi3g17120 10.0kb downstream 10.0kb downstream 14383 true Bd3: 15235879-15250261 Brachypodium distachyon
Bradi3g17120 10.0kb downstream 10.0kb downstream 10000 false Bd3: 15235879-15245878 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124574129 5269 Grass View MSA
122042450 5273 Angiosperm View MSA
121347502 5274 Embryophyte View MSA
123426698 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.313        
cufflinks 9.727        
cufflinks 9.532        
cufflinks 10.385        
cufflinks 5.333        
cufflinks 9.934     High  
cufflinks 9.524        
cufflinks 8.163        
cufflinks 9.152        
cufflinks 10.195        
cufflinks 9.483     High  
cufflinks 9.256     High  
cufflinks 10.229     High  
cufflinks 10.096     High  
cufflinks 9.479     High  
cufflinks 9.581     High  
cufflinks 9.374        
cufflinks 81.32     High High
cufflinks 8.454        
cufflinks 6.433        
cufflinks 10.353        
cufflinks 10.471     High  
cufflinks 8.1        
cufflinks 7.936        
cufflinks 8.792        
cufflinks 10.315        
cufflinks 5.837        
cufflinks 9.147        
cufflinks 9.603        
cufflinks 7.382        

0 Strain