Gene : Bradi3g22590 B. distachyon v3.1
Genomic Order:  2880 Name:  ? Bradi3g22590
Secondary Identifier:  ? PAC:32814995
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g22590 0.5kb upstream 0.5kb upstream 1317 true Bd3: 21820165-21821481 Brachypodium distachyon
Bradi3g22590 0.5kb upstream 0.5kb upstream 500 false Bd3: 21820165-21820664 Brachypodium distachyon
Bradi3g22590 0.5kb downstream 0.5kb downstream 1317 true Bd3: 21820665-21821981 Brachypodium distachyon
Bradi3g22590 0.5kb downstream 0.5kb downstream 500 false Bd3: 21821482-21821981 Brachypodium distachyon
Bradi3g22590 1.0kb upstream 1.0kb upstream 1817 true Bd3: 21819665-21821481 Brachypodium distachyon
Bradi3g22590 1.0kb upstream 1.0kb upstream 1000 false Bd3: 21819665-21820664 Brachypodium distachyon
Bradi3g22590 1.0kb downstream 1.0kb downstream 1817 true Bd3: 21820665-21822481 Brachypodium distachyon
Bradi3g22590 1.0kb downstream 1.0kb downstream 1000 false Bd3: 21821482-21822481 Brachypodium distachyon
Bradi3g22590 2.0kb upstream 2.0kb upstream 2817 true Bd3: 21818665-21821481 Brachypodium distachyon
Bradi3g22590 2.0kb upstream 2.0kb upstream 2000 false Bd3: 21818665-21820664 Brachypodium distachyon
Bradi3g22590 2.0kb downstream 2.0kb downstream 2817 true Bd3: 21820665-21823481 Brachypodium distachyon
Bradi3g22590 2.0kb downstream 2.0kb downstream 2000 false Bd3: 21821482-21823481 Brachypodium distachyon
Bradi3g22590 5.0kb upstream 5.0kb upstream 5817 true Bd3: 21815665-21821481 Brachypodium distachyon
Bradi3g22590 5.0kb upstream 5.0kb upstream 5000 false Bd3: 21815665-21820664 Brachypodium distachyon
Bradi3g22590 5.0kb downstream 5.0kb downstream 5817 true Bd3: 21820665-21826481 Brachypodium distachyon
Bradi3g22590 5.0kb downstream 5.0kb downstream 5000 false Bd3: 21821482-21826481 Brachypodium distachyon
Bradi3g22590 10.0kb upstream 10.0kb upstream 10817 true Bd3: 21810665-21821481 Brachypodium distachyon
Bradi3g22590 10.0kb upstream 10.0kb upstream 10000 false Bd3: 21810665-21820664 Brachypodium distachyon
Bradi3g22590 10.0kb downstream 10.0kb downstream 10817 true Bd3: 21820665-21831481 Brachypodium distachyon
Bradi3g22590 10.0kb downstream 10.0kb downstream 10000 false Bd3: 21821482-21831481 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121994570 5273 Angiosperm View MSA
124584771 5269 Grass View MSA
121264794 5274 Embryophyte View MSA
123303225 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.705        
cufflinks 6.781        
cufflinks 6.757        
cufflinks 11.563     High  
cufflinks 13.618     High  
cufflinks 5.961        
cufflinks 8.376        
cufflinks 6.006        
cufflinks 6.36        
cufflinks 12.056     High  
cufflinks 0.042     Low Low
cufflinks 2.95        
cufflinks 0.109       Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.678        
cufflinks 7.127        
cufflinks 25.16     High  
cufflinks 64.658     High High
cufflinks 46.907     High High
cufflinks 52.052     High High
cufflinks 86.886     High High
cufflinks 5.123        
cufflinks 8.924        
cufflinks 8.904        
cufflinks 11.809     High  
cufflinks 10.027        
cufflinks 0.278       Low
cufflinks 16.829     High  
cufflinks 15.211     High  
cufflinks 20.829     High  

0 Strain