Gene : Bradi3g22620 B. distachyon v3.1
Defline:  (1 of 1) PTHR12300//PTHR12300:SF26 - HVA22-LIKE PROTEINS // HVA22-LIKE PROTEIN G-RELATED Genomic Order:  2885
Name:  ? Bradi3g22620 Secondary Identifier:  ? PAC:32816178
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g22620 0.5kb upstream 0.5kb upstream 4601 true Bd3: 21852582-21857182 Brachypodium distachyon
Bradi3g22620 0.5kb upstream 0.5kb upstream 500 false Bd3: 21852582-21853081 Brachypodium distachyon
Bradi3g22620 0.5kb downstream 0.5kb downstream 4601 true Bd3: 21853082-21857682 Brachypodium distachyon
Bradi3g22620 0.5kb downstream 0.5kb downstream 500 false Bd3: 21857183-21857682 Brachypodium distachyon
Bradi3g22620 1.0kb upstream 1.0kb upstream 5101 true Bd3: 21852082-21857182 Brachypodium distachyon
Bradi3g22620 1.0kb upstream 1.0kb upstream 1000 false Bd3: 21852082-21853081 Brachypodium distachyon
Bradi3g22620 1.0kb downstream 1.0kb downstream 5101 true Bd3: 21853082-21858182 Brachypodium distachyon
Bradi3g22620 1.0kb downstream 1.0kb downstream 1000 false Bd3: 21857183-21858182 Brachypodium distachyon
Bradi3g22620 2.0kb upstream 2.0kb upstream 6101 true Bd3: 21851082-21857182 Brachypodium distachyon
Bradi3g22620 2.0kb upstream 2.0kb upstream 2000 false Bd3: 21851082-21853081 Brachypodium distachyon
Bradi3g22620 2.0kb downstream 2.0kb downstream 6101 true Bd3: 21853082-21859182 Brachypodium distachyon
Bradi3g22620 2.0kb downstream 2.0kb downstream 2000 false Bd3: 21857183-21859182 Brachypodium distachyon
Bradi3g22620 5.0kb upstream 5.0kb upstream 9101 true Bd3: 21848082-21857182 Brachypodium distachyon
Bradi3g22620 5.0kb upstream 5.0kb upstream 5000 false Bd3: 21848082-21853081 Brachypodium distachyon
Bradi3g22620 5.0kb downstream 5.0kb downstream 9101 true Bd3: 21853082-21862182 Brachypodium distachyon
Bradi3g22620 5.0kb downstream 5.0kb downstream 5000 false Bd3: 21857183-21862182 Brachypodium distachyon
Bradi3g22620 10.0kb upstream 10.0kb upstream 14101 true Bd3: 21843082-21857182 Brachypodium distachyon
Bradi3g22620 10.0kb upstream 10.0kb upstream 10000 false Bd3: 21843082-21853081 Brachypodium distachyon
Bradi3g22620 10.0kb downstream 10.0kb downstream 14101 true Bd3: 21853082-21867182 Brachypodium distachyon
Bradi3g22620 10.0kb downstream 10.0kb downstream 10000 false Bd3: 21857183-21867182 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124567957 5269 Grass View MSA
122050664 5273 Angiosperm View MSA
121348530 5274 Embryophyte View MSA
123427624 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.325        
cufflinks 2.219        
cufflinks 2.508        
cufflinks 2.304        
cufflinks 1.533        
cufflinks 1.963        
cufflinks 1.905        
cufflinks 1.74        
cufflinks 1.792        
cufflinks 1.667        
cufflinks 0.012     Low Low
cufflinks 1.598        
cufflinks 0.03     Low Low
cufflinks 0.013     Low Low
cufflinks 0.623        
cufflinks 2.044        
cufflinks 1.887        
cufflinks 3.94        
cufflinks 2.479        
cufflinks 0.097     Low Low
cufflinks 2.408        
cufflinks 2.037        
cufflinks 1.607        
cufflinks 1.566        
cufflinks 1.887        
cufflinks 2.472        
cufflinks 0.015     Low Low
cufflinks 1.81        
cufflinks 1.817        
cufflinks 3.398        

0 Strain