Gene : Bradi3g22897 B. distachyon v3.1
Defline:  (1 of 2) PTHR13011 - TFIIF-ALPHA Genomic Order:  2923
Name:  ? Bradi3g22897 Secondary Identifier:  ? PAC:32823730
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g22897 0.5kb upstream 0.5kb upstream 8352 true Bd3: 22193347-22201698 Brachypodium distachyon
Bradi3g22897 0.5kb upstream 0.5kb upstream 500 false Bd3: 22201199-22201698 Brachypodium distachyon
Bradi3g22897 0.5kb downstream 0.5kb downstream 8352 true Bd3: 22192847-22201198 Brachypodium distachyon
Bradi3g22897 0.5kb downstream 0.5kb downstream 500 false Bd3: 22192847-22193346 Brachypodium distachyon
Bradi3g22897 1.0kb upstream 1.0kb upstream 8852 true Bd3: 22193347-22202198 Brachypodium distachyon
Bradi3g22897 1.0kb upstream 1.0kb upstream 1000 false Bd3: 22201199-22202198 Brachypodium distachyon
Bradi3g22897 1.0kb downstream 1.0kb downstream 8852 true Bd3: 22192347-22201198 Brachypodium distachyon
Bradi3g22897 1.0kb downstream 1.0kb downstream 1000 false Bd3: 22192347-22193346 Brachypodium distachyon
Bradi3g22897 2.0kb upstream 2.0kb upstream 9852 true Bd3: 22193347-22203198 Brachypodium distachyon
Bradi3g22897 2.0kb upstream 2.0kb upstream 2000 false Bd3: 22201199-22203198 Brachypodium distachyon
Bradi3g22897 2.0kb downstream 2.0kb downstream 9852 true Bd3: 22191347-22201198 Brachypodium distachyon
Bradi3g22897 2.0kb downstream 2.0kb downstream 2000 false Bd3: 22191347-22193346 Brachypodium distachyon
Bradi3g22897 5.0kb upstream 5.0kb upstream 12852 true Bd3: 22193347-22206198 Brachypodium distachyon
Bradi3g22897 5.0kb upstream 5.0kb upstream 5000 false Bd3: 22201199-22206198 Brachypodium distachyon
Bradi3g22897 5.0kb downstream 5.0kb downstream 12852 true Bd3: 22188347-22201198 Brachypodium distachyon
Bradi3g22897 5.0kb downstream 5.0kb downstream 5000 false Bd3: 22188347-22193346 Brachypodium distachyon
Bradi3g22897 10.0kb upstream 10.0kb upstream 17852 true Bd3: 22193347-22211198 Brachypodium distachyon
Bradi3g22897 10.0kb upstream 10.0kb upstream 10000 false Bd3: 22201199-22211198 Brachypodium distachyon
Bradi3g22897 10.0kb downstream 10.0kb downstream 17852 true Bd3: 22183347-22201198 Brachypodium distachyon
Bradi3g22897 10.0kb downstream 10.0kb downstream 10000 false Bd3: 22183347-22193346 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124571540 5269 Grass View MSA
122042161 5273 Angiosperm View MSA
121347251 5274 Embryophyte View MSA
123426399 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.896        
cufflinks 4.671        
cufflinks 4.78        
cufflinks 4.23        
cufflinks 3.358        
cufflinks 4.185        
cufflinks 4.137        
cufflinks 3.734        
cufflinks 4.314        
cufflinks 4.624        
cufflinks 3.845        
cufflinks 4.67        
cufflinks 3.488        
cufflinks 3.326       Low
cufflinks 3.98        
cufflinks 4.284        
cufflinks 4.126        
cufflinks 6.912       High
cufflinks 3.351        
cufflinks 3.647        
cufflinks 5.615       High
cufflinks 4.824        
cufflinks 3.909        
cufflinks 4.004        
cufflinks 4.084        
cufflinks 5.082        
cufflinks 3.725        
cufflinks 4.723        
cufflinks 4.607        
cufflinks 6.296       High

0 Strain