Gene : Bradi3g22960 B. distachyon v3.1
Defline:  (1 of 1) PTHR23026 - NADPH NITROREDUCTASE Genomic Order:  2930
Name:  ? Bradi3g22960 Secondary Identifier:  ? PAC:32818563
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g22960 0.5kb upstream 0.5kb upstream 4640 true Bd3: 22277861-22282500 Brachypodium distachyon
Bradi3g22960 0.5kb upstream 0.5kb upstream 500 false Bd3: 22277861-22278360 Brachypodium distachyon
Bradi3g22960 0.5kb downstream 0.5kb downstream 4640 true Bd3: 22278361-22283000 Brachypodium distachyon
Bradi3g22960 0.5kb downstream 0.5kb downstream 500 false Bd3: 22282501-22283000 Brachypodium distachyon
Bradi3g22960 1.0kb upstream 1.0kb upstream 5140 true Bd3: 22277361-22282500 Brachypodium distachyon
Bradi3g22960 1.0kb upstream 1.0kb upstream 1000 false Bd3: 22277361-22278360 Brachypodium distachyon
Bradi3g22960 1.0kb downstream 1.0kb downstream 5140 true Bd3: 22278361-22283500 Brachypodium distachyon
Bradi3g22960 1.0kb downstream 1.0kb downstream 1000 false Bd3: 22282501-22283500 Brachypodium distachyon
Bradi3g22960 2.0kb upstream 2.0kb upstream 6140 true Bd3: 22276361-22282500 Brachypodium distachyon
Bradi3g22960 2.0kb upstream 2.0kb upstream 2000 false Bd3: 22276361-22278360 Brachypodium distachyon
Bradi3g22960 2.0kb downstream 2.0kb downstream 6140 true Bd3: 22278361-22284500 Brachypodium distachyon
Bradi3g22960 2.0kb downstream 2.0kb downstream 2000 false Bd3: 22282501-22284500 Brachypodium distachyon
Bradi3g22960 5.0kb upstream 5.0kb upstream 9140 true Bd3: 22273361-22282500 Brachypodium distachyon
Bradi3g22960 5.0kb upstream 5.0kb upstream 5000 false Bd3: 22273361-22278360 Brachypodium distachyon
Bradi3g22960 5.0kb downstream 5.0kb downstream 9140 true Bd3: 22278361-22287500 Brachypodium distachyon
Bradi3g22960 5.0kb downstream 5.0kb downstream 5000 false Bd3: 22282501-22287500 Brachypodium distachyon
Bradi3g22960 10.0kb upstream 10.0kb upstream 14140 true Bd3: 22268361-22282500 Brachypodium distachyon
Bradi3g22960 10.0kb upstream 10.0kb upstream 10000 false Bd3: 22268361-22278360 Brachypodium distachyon
Bradi3g22960 10.0kb downstream 10.0kb downstream 14140 true Bd3: 22278361-22292500 Brachypodium distachyon
Bradi3g22960 10.0kb downstream 10.0kb downstream 10000 false Bd3: 22282501-22292500 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124580783 5269 Grass View MSA
122045526 5273 Angiosperm View MSA
121345856 5274 Embryophyte View MSA
123380279 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.816        
cufflinks 1.02        
cufflinks 1.192        
cufflinks 1.04        
cufflinks 0.54       Low
cufflinks 0.807        
cufflinks 0.947        
cufflinks 1.052        
cufflinks 0.999        
cufflinks 0.771        
cufflinks 1.076        
cufflinks 0.967        
cufflinks 0.757        
cufflinks 0.875        
cufflinks 0.717        
cufflinks 0.968        
cufflinks 0.617       Low
cufflinks 1.23        
cufflinks 1.16        
cufflinks 1.561       High
cufflinks 1.009        
cufflinks 0.994        
cufflinks 0.924        
cufflinks 0.83        
cufflinks 0.708       Low
cufflinks 1.085        
cufflinks 1.173        
cufflinks 1.083        
cufflinks 1.083        
cufflinks 0.978        

0 Strain