Gene : Bradi3g23290 B. distachyon v3.1
Defline:  (1 of 1) PTHR12864//PTHR12864:SF13 - RAN BINDING PROTEIN 9-RELATED Genomic Order:  2977
Name:  ? Bradi3g23290 Secondary Identifier:  ? PAC:32814387
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g23290 0.5kb upstream 0.5kb upstream 13640 true Bd3: 22844089-22857728 Brachypodium distachyon
Bradi3g23290 0.5kb upstream 0.5kb upstream 500 false Bd3: 22857229-22857728 Brachypodium distachyon
Bradi3g23290 0.5kb downstream 0.5kb downstream 13640 true Bd3: 22843589-22857228 Brachypodium distachyon
Bradi3g23290 0.5kb downstream 0.5kb downstream 500 false Bd3: 22843589-22844088 Brachypodium distachyon
Bradi3g23290 1.0kb upstream 1.0kb upstream 14140 true Bd3: 22844089-22858228 Brachypodium distachyon
Bradi3g23290 1.0kb upstream 1.0kb upstream 1000 false Bd3: 22857229-22858228 Brachypodium distachyon
Bradi3g23290 1.0kb downstream 1.0kb downstream 14140 true Bd3: 22843089-22857228 Brachypodium distachyon
Bradi3g23290 1.0kb downstream 1.0kb downstream 1000 false Bd3: 22843089-22844088 Brachypodium distachyon
Bradi3g23290 2.0kb upstream 2.0kb upstream 15140 true Bd3: 22844089-22859228 Brachypodium distachyon
Bradi3g23290 2.0kb upstream 2.0kb upstream 2000 false Bd3: 22857229-22859228 Brachypodium distachyon
Bradi3g23290 2.0kb downstream 2.0kb downstream 15140 true Bd3: 22842089-22857228 Brachypodium distachyon
Bradi3g23290 2.0kb downstream 2.0kb downstream 2000 false Bd3: 22842089-22844088 Brachypodium distachyon
Bradi3g23290 5.0kb upstream 5.0kb upstream 18140 true Bd3: 22844089-22862228 Brachypodium distachyon
Bradi3g23290 5.0kb upstream 5.0kb upstream 5000 false Bd3: 22857229-22862228 Brachypodium distachyon
Bradi3g23290 5.0kb downstream 5.0kb downstream 18140 true Bd3: 22839089-22857228 Brachypodium distachyon
Bradi3g23290 5.0kb downstream 5.0kb downstream 5000 false Bd3: 22839089-22844088 Brachypodium distachyon
Bradi3g23290 10.0kb upstream 10.0kb upstream 23140 true Bd3: 22844089-22867228 Brachypodium distachyon
Bradi3g23290 10.0kb upstream 10.0kb upstream 10000 false Bd3: 22857229-22867228 Brachypodium distachyon
Bradi3g23290 10.0kb downstream 10.0kb downstream 23140 true Bd3: 22834089-22857228 Brachypodium distachyon
Bradi3g23290 10.0kb downstream 10.0kb downstream 10000 false Bd3: 22834089-22844088 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124576124 5269 Grass View MSA
122043274 5273 Angiosperm View MSA
121347817 5274 Embryophyte View MSA
123424448 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.831        
cufflinks 1.064        
cufflinks 1.157        
cufflinks 0.876        
cufflinks 0.55       Low
cufflinks 0.904        
cufflinks 0.903        
cufflinks 0.868        
cufflinks 0.881        
cufflinks 0.691        
cufflinks 1.269       High
cufflinks 0.95        
cufflinks 1.01        
cufflinks 0.882        
cufflinks 0.876        
cufflinks 0.991        
cufflinks 0.511       Low
cufflinks 1.208        
cufflinks 0.973        
cufflinks 0.521       Low
cufflinks 0.803        
cufflinks 1.124        
cufflinks 0.872        
cufflinks 0.837        
cufflinks 0.79        
cufflinks 1.101        
cufflinks 1.199        
cufflinks 1.059        
cufflinks 0.981        
cufflinks 0.962        

0 Strain