Gene : Bradi3g23280 B. distachyon v3.1
Defline:  (1 of 6) 2.3.1.64 - Agmatine N(4)-coumaroyltransferase / p-coumaroyl-CoA-agmatine N-p-coumaroyltransferase Genomic Order:  2976
Name:  ? Bradi3g23280 Secondary Identifier:  ? PAC:32818733
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g23280 0.5kb upstream 0.5kb upstream 2177 true Bd3: 22823008-22825184 Brachypodium distachyon
Bradi3g23280 0.5kb upstream 0.5kb upstream 500 false Bd3: 22824685-22825184 Brachypodium distachyon
Bradi3g23280 0.5kb downstream 0.5kb downstream 2177 true Bd3: 22822508-22824684 Brachypodium distachyon
Bradi3g23280 0.5kb downstream 0.5kb downstream 500 false Bd3: 22822508-22823007 Brachypodium distachyon
Bradi3g23280 1.0kb upstream 1.0kb upstream 2677 true Bd3: 22823008-22825684 Brachypodium distachyon
Bradi3g23280 1.0kb upstream 1.0kb upstream 1000 false Bd3: 22824685-22825684 Brachypodium distachyon
Bradi3g23280 1.0kb downstream 1.0kb downstream 2677 true Bd3: 22822008-22824684 Brachypodium distachyon
Bradi3g23280 1.0kb downstream 1.0kb downstream 1000 false Bd3: 22822008-22823007 Brachypodium distachyon
Bradi3g23280 2.0kb upstream 2.0kb upstream 3677 true Bd3: 22823008-22826684 Brachypodium distachyon
Bradi3g23280 2.0kb upstream 2.0kb upstream 2000 false Bd3: 22824685-22826684 Brachypodium distachyon
Bradi3g23280 2.0kb downstream 2.0kb downstream 3677 true Bd3: 22821008-22824684 Brachypodium distachyon
Bradi3g23280 2.0kb downstream 2.0kb downstream 2000 false Bd3: 22821008-22823007 Brachypodium distachyon
Bradi3g23280 5.0kb upstream 5.0kb upstream 6677 true Bd3: 22823008-22829684 Brachypodium distachyon
Bradi3g23280 5.0kb upstream 5.0kb upstream 5000 false Bd3: 22824685-22829684 Brachypodium distachyon
Bradi3g23280 5.0kb downstream 5.0kb downstream 6677 true Bd3: 22818008-22824684 Brachypodium distachyon
Bradi3g23280 5.0kb downstream 5.0kb downstream 5000 false Bd3: 22818008-22823007 Brachypodium distachyon
Bradi3g23280 10.0kb upstream 10.0kb upstream 11677 true Bd3: 22823008-22834684 Brachypodium distachyon
Bradi3g23280 10.0kb upstream 10.0kb upstream 10000 false Bd3: 22824685-22834684 Brachypodium distachyon
Bradi3g23280 10.0kb downstream 10.0kb downstream 11677 true Bd3: 22813008-22824684 Brachypodium distachyon
Bradi3g23280 10.0kb downstream 10.0kb downstream 10000 false Bd3: 22813008-22823007 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124581716 5269 Grass View MSA
122051149 5273 Angiosperm View MSA
121350983 5274 Embryophyte View MSA
123428782 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.194        
cufflinks 0.008     Low Low
cufflinks 0.04     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.979       High
cufflinks 0.01     Low Low
cufflinks 0.025     Low  
cufflinks 0.019     Low  
cufflinks 0.015     Low Low
cufflinks 0.037     Low  
cufflinks 0.43        
cufflinks 0.039     Low  
cufflinks 0.031     Low  
cufflinks 0.04     Low  
cufflinks 0.236        
cufflinks 0.032     Low  
cufflinks 0.077     Low  
cufflinks 0.907       High
cufflinks 1.426       High
cufflinks 101.293     High High
cufflinks 0.05     Low  
cufflinks 0.018     Low  
cufflinks 0.059     Low  
cufflinks 0.02     Low  
cufflinks 0.053     Low  
cufflinks 0.049     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.016     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain