Gene : Bradi3g23330 B. distachyon v3.1
Defline:  (1 of 1) PTHR24073:SF350 - RAS-RELATED PROTEIN RABA4C Genomic Order:  2983
Name:  ? Bradi3g23330 Secondary Identifier:  ? PAC:32822265
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g23330 0.5kb upstream 0.5kb upstream 4498 true Bd3: 22909384-22913881 Brachypodium distachyon
Bradi3g23330 0.5kb upstream 0.5kb upstream 500 false Bd3: 22913382-22913881 Brachypodium distachyon
Bradi3g23330 0.5kb downstream 0.5kb downstream 4498 true Bd3: 22908884-22913381 Brachypodium distachyon
Bradi3g23330 0.5kb downstream 0.5kb downstream 500 false Bd3: 22908884-22909383 Brachypodium distachyon
Bradi3g23330 1.0kb upstream 1.0kb upstream 4998 true Bd3: 22909384-22914381 Brachypodium distachyon
Bradi3g23330 1.0kb upstream 1.0kb upstream 1000 false Bd3: 22913382-22914381 Brachypodium distachyon
Bradi3g23330 1.0kb downstream 1.0kb downstream 4998 true Bd3: 22908384-22913381 Brachypodium distachyon
Bradi3g23330 1.0kb downstream 1.0kb downstream 1000 false Bd3: 22908384-22909383 Brachypodium distachyon
Bradi3g23330 2.0kb upstream 2.0kb upstream 5998 true Bd3: 22909384-22915381 Brachypodium distachyon
Bradi3g23330 2.0kb upstream 2.0kb upstream 2000 false Bd3: 22913382-22915381 Brachypodium distachyon
Bradi3g23330 2.0kb downstream 2.0kb downstream 5998 true Bd3: 22907384-22913381 Brachypodium distachyon
Bradi3g23330 2.0kb downstream 2.0kb downstream 2000 false Bd3: 22907384-22909383 Brachypodium distachyon
Bradi3g23330 5.0kb upstream 5.0kb upstream 8998 true Bd3: 22909384-22918381 Brachypodium distachyon
Bradi3g23330 5.0kb upstream 5.0kb upstream 5000 false Bd3: 22913382-22918381 Brachypodium distachyon
Bradi3g23330 5.0kb downstream 5.0kb downstream 8998 true Bd3: 22904384-22913381 Brachypodium distachyon
Bradi3g23330 5.0kb downstream 5.0kb downstream 5000 false Bd3: 22904384-22909383 Brachypodium distachyon
Bradi3g23330 10.0kb upstream 10.0kb upstream 13998 true Bd3: 22909384-22923381 Brachypodium distachyon
Bradi3g23330 10.0kb upstream 10.0kb upstream 10000 false Bd3: 22913382-22923381 Brachypodium distachyon
Bradi3g23330 10.0kb downstream 10.0kb downstream 13998 true Bd3: 22899384-22913381 Brachypodium distachyon
Bradi3g23330 10.0kb downstream 10.0kb downstream 10000 false Bd3: 22899384-22909383 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124588863 5269 Grass View MSA
122047606 5273 Angiosperm View MSA
121351595 5274 Embryophyte View MSA
123426852 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.693     High  
cufflinks 12.799     High  
cufflinks 12.672     High  
cufflinks 15.724     High  
cufflinks 10.721     High  
cufflinks 11.669     High  
cufflinks 11.866     High  
cufflinks 11.77     High  
cufflinks 11.687     High  
cufflinks 12.511     High  
cufflinks 3.775       Low
cufflinks 9.688     High  
cufflinks 3.068       Low
cufflinks 3.373       Low
cufflinks 9.552     High  
cufflinks 12.528     High  
cufflinks 14.731     High  
cufflinks 27.043     High High
cufflinks 17.485     High  
cufflinks 9.885        
cufflinks 36.719     High High
cufflinks 10.42     High  
cufflinks 10.665     High  
cufflinks 11.823     High  
cufflinks 13.006     High  
cufflinks 12.819     High  
cufflinks 3.792       Low
cufflinks 14.226     High  
cufflinks 12.036     High  
cufflinks 24.549     High High

0 Strain