Gene : Bradi4g37580 B. distachyon v3.1
Defline:  (1 of 2) PTHR12804 - MICROSOMAL SIGNAL PEPTIDASE 23 KD SUBUNIT SPC22/23 Genomic Order:  4849
Name:  ? Bradi4g37580 Secondary Identifier:  ? PAC:32788141
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g37580 0.5kb upstream 0.5kb upstream 4808 true Bd4: 42594066-42598873 Brachypodium distachyon
Bradi4g37580 0.5kb upstream 0.5kb upstream 500 false Bd4: 42598374-42598873 Brachypodium distachyon
Bradi4g37580 0.5kb downstream 0.5kb downstream 4808 true Bd4: 42593566-42598373 Brachypodium distachyon
Bradi4g37580 0.5kb downstream 0.5kb downstream 500 false Bd4: 42593566-42594065 Brachypodium distachyon
Bradi4g37580 1.0kb upstream 1.0kb upstream 5308 true Bd4: 42594066-42599373 Brachypodium distachyon
Bradi4g37580 1.0kb upstream 1.0kb upstream 1000 false Bd4: 42598374-42599373 Brachypodium distachyon
Bradi4g37580 1.0kb downstream 1.0kb downstream 5308 true Bd4: 42593066-42598373 Brachypodium distachyon
Bradi4g37580 1.0kb downstream 1.0kb downstream 1000 false Bd4: 42593066-42594065 Brachypodium distachyon
Bradi4g37580 2.0kb upstream 2.0kb upstream 6308 true Bd4: 42594066-42600373 Brachypodium distachyon
Bradi4g37580 2.0kb upstream 2.0kb upstream 2000 false Bd4: 42598374-42600373 Brachypodium distachyon
Bradi4g37580 2.0kb downstream 2.0kb downstream 6308 true Bd4: 42592066-42598373 Brachypodium distachyon
Bradi4g37580 2.0kb downstream 2.0kb downstream 2000 false Bd4: 42592066-42594065 Brachypodium distachyon
Bradi4g37580 5.0kb upstream 5.0kb upstream 9308 true Bd4: 42594066-42603373 Brachypodium distachyon
Bradi4g37580 5.0kb upstream 5.0kb upstream 5000 false Bd4: 42598374-42603373 Brachypodium distachyon
Bradi4g37580 5.0kb downstream 5.0kb downstream 9308 true Bd4: 42589066-42598373 Brachypodium distachyon
Bradi4g37580 5.0kb downstream 5.0kb downstream 5000 false Bd4: 42589066-42594065 Brachypodium distachyon
Bradi4g37580 10.0kb upstream 10.0kb upstream 14308 true Bd4: 42594066-42608373 Brachypodium distachyon
Bradi4g37580 10.0kb upstream 10.0kb upstream 10000 false Bd4: 42598374-42608373 Brachypodium distachyon
Bradi4g37580 10.0kb downstream 10.0kb downstream 14308 true Bd4: 42584066-42598373 Brachypodium distachyon
Bradi4g37580 10.0kb downstream 10.0kb downstream 10000 false Bd4: 42584066-42594065 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124574519 5269 Grass View MSA
122042946 5273 Angiosperm View MSA
121344173 5274 Embryophyte View MSA
123424952 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.821        
cufflinks 5.078        
cufflinks 4.266        
cufflinks 5.75        
cufflinks 5.357        
cufflinks 4.423        
cufflinks 4.852        
cufflinks 4.27        
cufflinks 5.224        
cufflinks 4.662        
cufflinks 2.192       Low
cufflinks 2.934       Low
cufflinks 1.892       Low
cufflinks 2.256       Low
cufflinks 4.79        
cufflinks 4.682        
cufflinks 10.971       High
cufflinks 7.543        
cufflinks 11.193       High
cufflinks 5.074        
cufflinks 11.446     High High
cufflinks 3.633        
cufflinks 4.45        
cufflinks 4.818        
cufflinks 5.238        
cufflinks 4.122        
cufflinks 2.638       Low
cufflinks 3.9        
cufflinks 4.037        
cufflinks 6.562        

0 Strain