Gene : Bradi3g25620 B. distachyon v3.1
Defline:  (1 of 1) PTHR12897 - COLON CANCER-ASSOCIATED PROTEIN MIC1 Genomic Order:  3072
Name:  ? Bradi3g25620 Secondary Identifier:  ? PAC:32819667
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g25620 0.5kb upstream 0.5kb upstream 16175 true Bd3: 25688909-25705083 Brachypodium distachyon
Bradi3g25620 0.5kb upstream 0.5kb upstream 500 false Bd3: 25688909-25689408 Brachypodium distachyon
Bradi3g25620 0.5kb downstream 0.5kb downstream 16175 true Bd3: 25689409-25705583 Brachypodium distachyon
Bradi3g25620 0.5kb downstream 0.5kb downstream 500 false Bd3: 25705084-25705583 Brachypodium distachyon
Bradi3g25620 1.0kb upstream 1.0kb upstream 16675 true Bd3: 25688409-25705083 Brachypodium distachyon
Bradi3g25620 1.0kb upstream 1.0kb upstream 1000 false Bd3: 25688409-25689408 Brachypodium distachyon
Bradi3g25620 1.0kb downstream 1.0kb downstream 16675 true Bd3: 25689409-25706083 Brachypodium distachyon
Bradi3g25620 1.0kb downstream 1.0kb downstream 1000 false Bd3: 25705084-25706083 Brachypodium distachyon
Bradi3g25620 2.0kb upstream 2.0kb upstream 17675 true Bd3: 25687409-25705083 Brachypodium distachyon
Bradi3g25620 2.0kb upstream 2.0kb upstream 2000 false Bd3: 25687409-25689408 Brachypodium distachyon
Bradi3g25620 2.0kb downstream 2.0kb downstream 17675 true Bd3: 25689409-25707083 Brachypodium distachyon
Bradi3g25620 2.0kb downstream 2.0kb downstream 2000 false Bd3: 25705084-25707083 Brachypodium distachyon
Bradi3g25620 5.0kb upstream 5.0kb upstream 20675 true Bd3: 25684409-25705083 Brachypodium distachyon
Bradi3g25620 5.0kb upstream 5.0kb upstream 5000 false Bd3: 25684409-25689408 Brachypodium distachyon
Bradi3g25620 5.0kb downstream 5.0kb downstream 20675 true Bd3: 25689409-25710083 Brachypodium distachyon
Bradi3g25620 5.0kb downstream 5.0kb downstream 5000 false Bd3: 25705084-25710083 Brachypodium distachyon
Bradi3g25620 10.0kb upstream 10.0kb upstream 25675 true Bd3: 25679409-25705083 Brachypodium distachyon
Bradi3g25620 10.0kb upstream 10.0kb upstream 10000 false Bd3: 25679409-25689408 Brachypodium distachyon
Bradi3g25620 10.0kb downstream 10.0kb downstream 25675 true Bd3: 25689409-25715083 Brachypodium distachyon
Bradi3g25620 10.0kb downstream 10.0kb downstream 10000 false Bd3: 25705084-25715083 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124578032 5269 Grass View MSA
122048416 5273 Angiosperm View MSA
121348965 5274 Embryophyte View MSA
123424129 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.645        
cufflinks 6.606        
cufflinks 6.294        
cufflinks 4.546        
cufflinks 1.619       Low
cufflinks 6.199        
cufflinks 5.866        
cufflinks 3.954        
cufflinks 4.684        
cufflinks 2.847        
cufflinks 5.122        
cufflinks 4.922        
cufflinks 4.199        
cufflinks 3.932        
cufflinks 2.894        
cufflinks 5.726        
cufflinks 3.39        
cufflinks 12.095     High High
cufflinks 5.188        
cufflinks 0.543       Low
cufflinks 5.078        
cufflinks 5.582        
cufflinks 3.707        
cufflinks 4.305        
cufflinks 4.448        
cufflinks 5.634        
cufflinks 5.513        
cufflinks 5.813        
cufflinks 5.543        
cufflinks 4.933        

0 Strain