Gene : Bradi3g26391 B. distachyon v3.1
Defline:  (1 of 11) 4.1.1.39 - Ribulose-bisphosphate carboxylase / RuBP carboxylase Genomic Order:  3118
Name:  ? Bradi3g26391 Secondary Identifier:  ? PAC:32812782
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon CALVIN-PWY Brachypodium distachyon pathologic  
Bdistachyon PHOTOALL-PWY Brachypodium distachyon pathologic  
Bdistachyon PWY-5723 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g26391 0.5kb upstream 0.5kb upstream 2137 true Bd3: 26814454-26816590 Brachypodium distachyon
Bradi3g26391 0.5kb upstream 0.5kb upstream 500 false Bd3: 26816091-26816590 Brachypodium distachyon
Bradi3g26391 0.5kb downstream 0.5kb downstream 2137 true Bd3: 26813954-26816090 Brachypodium distachyon
Bradi3g26391 0.5kb downstream 0.5kb downstream 500 false Bd3: 26813954-26814453 Brachypodium distachyon
Bradi3g26391 1.0kb upstream 1.0kb upstream 2637 true Bd3: 26814454-26817090 Brachypodium distachyon
Bradi3g26391 1.0kb upstream 1.0kb upstream 1000 false Bd3: 26816091-26817090 Brachypodium distachyon
Bradi3g26391 1.0kb downstream 1.0kb downstream 2637 true Bd3: 26813454-26816090 Brachypodium distachyon
Bradi3g26391 1.0kb downstream 1.0kb downstream 1000 false Bd3: 26813454-26814453 Brachypodium distachyon
Bradi3g26391 2.0kb upstream 2.0kb upstream 3637 true Bd3: 26814454-26818090 Brachypodium distachyon
Bradi3g26391 2.0kb upstream 2.0kb upstream 2000 false Bd3: 26816091-26818090 Brachypodium distachyon
Bradi3g26391 2.0kb downstream 2.0kb downstream 3637 true Bd3: 26812454-26816090 Brachypodium distachyon
Bradi3g26391 2.0kb downstream 2.0kb downstream 2000 false Bd3: 26812454-26814453 Brachypodium distachyon
Bradi3g26391 5.0kb upstream 5.0kb upstream 6637 true Bd3: 26814454-26821090 Brachypodium distachyon
Bradi3g26391 5.0kb upstream 5.0kb upstream 5000 false Bd3: 26816091-26821090 Brachypodium distachyon
Bradi3g26391 5.0kb downstream 5.0kb downstream 6637 true Bd3: 26809454-26816090 Brachypodium distachyon
Bradi3g26391 5.0kb downstream 5.0kb downstream 5000 false Bd3: 26809454-26814453 Brachypodium distachyon
Bradi3g26391 10.0kb upstream 10.0kb upstream 11637 true Bd3: 26814454-26826090 Brachypodium distachyon
Bradi3g26391 10.0kb upstream 10.0kb upstream 10000 false Bd3: 26816091-26826090 Brachypodium distachyon
Bradi3g26391 10.0kb downstream 10.0kb downstream 11637 true Bd3: 26804454-26816090 Brachypodium distachyon
Bradi3g26391 10.0kb downstream 10.0kb downstream 10000 false Bd3: 26804454-26814453 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124590513 5269 Grass View MSA
122046951 5273 Angiosperm View MSA
121348432 5274 Embryophyte View MSA
123426346 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13649.304     High  
cufflinks 9253.976     High  
cufflinks 5997.831     High  
cufflinks 12810.753     High  
cufflinks 7319.044     High  
cufflinks 8649.068     High  
cufflinks 8823.673     High  
cufflinks 8668.854     High  
cufflinks 8527.339     High  
cufflinks 7675.341     High  
cufflinks 1633.82     High  
cufflinks 8430.199     High  
cufflinks 10655.597     High  
cufflinks 6006.714     High  
cufflinks 17225.574     High  
cufflinks 7179.292     High  
cufflinks 10688.496     High  
cufflinks 43.269     High Low
cufflinks 3992.801     High  
cufflinks 1861.629     High  
cufflinks 5453.864     High  
cufflinks 4821.967     High  
cufflinks 7925.793     High  
cufflinks 9399.671     High  
cufflinks 10075.221     High  
cufflinks 6078.688     High  
cufflinks 6786.956     High  
cufflinks 5368.587     High  
cufflinks 5933.031     High  
cufflinks 5318.723     High  

0 Strain