Gene : Bradi3g26717 B. distachyon v3.1
Defline:  (1 of 1) PTHR22950//PTHR22950:SF279 - AMINO ACID TRANSPORTER Genomic Order:  3140
Name:  ? Bradi3g26717 Secondary Identifier:  ? PAC:32819893
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g26717 0.5kb upstream 0.5kb upstream 2586 true Bd3: 27199370-27201955 Brachypodium distachyon
Bradi3g26717 0.5kb upstream 0.5kb upstream 500 false Bd3: 27199370-27199869 Brachypodium distachyon
Bradi3g26717 0.5kb downstream 0.5kb downstream 2586 true Bd3: 27199870-27202455 Brachypodium distachyon
Bradi3g26717 0.5kb downstream 0.5kb downstream 500 false Bd3: 27201956-27202455 Brachypodium distachyon
Bradi3g26717 1.0kb upstream 1.0kb upstream 3086 true Bd3: 27198870-27201955 Brachypodium distachyon
Bradi3g26717 1.0kb upstream 1.0kb upstream 1000 false Bd3: 27198870-27199869 Brachypodium distachyon
Bradi3g26717 1.0kb downstream 1.0kb downstream 3086 true Bd3: 27199870-27202955 Brachypodium distachyon
Bradi3g26717 1.0kb downstream 1.0kb downstream 1000 false Bd3: 27201956-27202955 Brachypodium distachyon
Bradi3g26717 2.0kb upstream 2.0kb upstream 4086 true Bd3: 27197870-27201955 Brachypodium distachyon
Bradi3g26717 2.0kb upstream 2.0kb upstream 2000 false Bd3: 27197870-27199869 Brachypodium distachyon
Bradi3g26717 2.0kb downstream 2.0kb downstream 4086 true Bd3: 27199870-27203955 Brachypodium distachyon
Bradi3g26717 2.0kb downstream 2.0kb downstream 2000 false Bd3: 27201956-27203955 Brachypodium distachyon
Bradi3g26717 5.0kb upstream 5.0kb upstream 7086 true Bd3: 27194870-27201955 Brachypodium distachyon
Bradi3g26717 5.0kb upstream 5.0kb upstream 5000 false Bd3: 27194870-27199869 Brachypodium distachyon
Bradi3g26717 5.0kb downstream 5.0kb downstream 7086 true Bd3: 27199870-27206955 Brachypodium distachyon
Bradi3g26717 5.0kb downstream 5.0kb downstream 5000 false Bd3: 27201956-27206955 Brachypodium distachyon
Bradi3g26717 10.0kb upstream 10.0kb upstream 12086 true Bd3: 27189870-27201955 Brachypodium distachyon
Bradi3g26717 10.0kb upstream 10.0kb upstream 10000 false Bd3: 27189870-27199869 Brachypodium distachyon
Bradi3g26717 10.0kb downstream 10.0kb downstream 12086 true Bd3: 27199870-27211955 Brachypodium distachyon
Bradi3g26717 10.0kb downstream 10.0kb downstream 10000 false Bd3: 27201956-27211955 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124571448 5269 Grass View MSA
122049335 5273 Angiosperm View MSA
123429000 5275 Viridiplantae View MSA
121348814 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.014     Low  
cufflinks 0.006     Low Low
cufflinks 0.019     Low  
cufflinks 0.008     Low  
cufflinks 0.026     Low  
cufflinks 0.018     Low  
cufflinks 0.007     Low Low
cufflinks 0.009     Low  
cufflinks 0.012     Low  
cufflinks 0.062     Low High
cufflinks 0.024     Low  
cufflinks 0.008     Low  
cufflinks 0.007     Low Low
cufflinks 0.009     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.009     Low  
cufflinks 0.021     Low  
cufflinks 0.06     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.05     Low  
cufflinks 0.031     Low  
cufflinks 0.015     Low  
cufflinks 0.016     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.008     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.101     Low High
cufflinks 0.006     Low Low
cufflinks 0.012     Low  

0 Strain