Gene : Bradi4g38510 B. distachyon v3.1
Defline:  (1 of 2) PTHR23105//PTHR23105:SF44 - RIBOSOMAL PROTEIN L7AE FAMILY MEMBER Genomic Order:  4969
Name:  ? Bradi4g38510 Secondary Identifier:  ? PAC:32784832
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g38510 0.5kb upstream 0.5kb upstream 2570 true Bd4: 43355762-43358331 Brachypodium distachyon
Bradi4g38510 0.5kb upstream 0.5kb upstream 500 false Bd4: 43355762-43356261 Brachypodium distachyon
Bradi4g38510 0.5kb downstream 0.5kb downstream 2570 true Bd4: 43356262-43358831 Brachypodium distachyon
Bradi4g38510 0.5kb downstream 0.5kb downstream 500 false Bd4: 43358332-43358831 Brachypodium distachyon
Bradi4g38510 1.0kb upstream 1.0kb upstream 3070 true Bd4: 43355262-43358331 Brachypodium distachyon
Bradi4g38510 1.0kb upstream 1.0kb upstream 1000 false Bd4: 43355262-43356261 Brachypodium distachyon
Bradi4g38510 1.0kb downstream 1.0kb downstream 3070 true Bd4: 43356262-43359331 Brachypodium distachyon
Bradi4g38510 1.0kb downstream 1.0kb downstream 1000 false Bd4: 43358332-43359331 Brachypodium distachyon
Bradi4g38510 2.0kb upstream 2.0kb upstream 4070 true Bd4: 43354262-43358331 Brachypodium distachyon
Bradi4g38510 2.0kb upstream 2.0kb upstream 2000 false Bd4: 43354262-43356261 Brachypodium distachyon
Bradi4g38510 2.0kb downstream 2.0kb downstream 4070 true Bd4: 43356262-43360331 Brachypodium distachyon
Bradi4g38510 2.0kb downstream 2.0kb downstream 2000 false Bd4: 43358332-43360331 Brachypodium distachyon
Bradi4g38510 5.0kb upstream 5.0kb upstream 7070 true Bd4: 43351262-43358331 Brachypodium distachyon
Bradi4g38510 5.0kb upstream 5.0kb upstream 5000 false Bd4: 43351262-43356261 Brachypodium distachyon
Bradi4g38510 5.0kb downstream 5.0kb downstream 7070 true Bd4: 43356262-43363331 Brachypodium distachyon
Bradi4g38510 5.0kb downstream 5.0kb downstream 5000 false Bd4: 43358332-43363331 Brachypodium distachyon
Bradi4g38510 10.0kb upstream 10.0kb upstream 12070 true Bd4: 43346262-43358331 Brachypodium distachyon
Bradi4g38510 10.0kb upstream 10.0kb upstream 10000 false Bd4: 43346262-43356261 Brachypodium distachyon
Bradi4g38510 10.0kb downstream 10.0kb downstream 12070 true Bd4: 43356262-43368331 Brachypodium distachyon
Bradi4g38510 10.0kb downstream 10.0kb downstream 10000 false Bd4: 43358332-43368331 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124590801 5269 Grass View MSA
122041557 5273 Angiosperm View MSA
121346293 5274 Embryophyte View MSA
123424403 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 72.565     High  
cufflinks 75.79     High  
cufflinks 64.394     High  
cufflinks 79.229     High  
cufflinks 65.055     High  
cufflinks 67.076     High  
cufflinks 71.564     High  
cufflinks 66.569     High  
cufflinks 66.754     High  
cufflinks 51.62     High Low
cufflinks 66.845     High  
cufflinks 68.962     High  
cufflinks 50.927     High Low
cufflinks 67.152     High  
cufflinks 65.487     High  
cufflinks 68.618     High  
cufflinks 91.81     High  
cufflinks 90.829     High  
cufflinks 99.929     High High
cufflinks 49.823     High Low
cufflinks 107.368     High High
cufflinks 51.849     High Low
cufflinks 68.649     High  
cufflinks 74.941     High  
cufflinks 78.037     High  
cufflinks 59.732     High  
cufflinks 69.147     High  
cufflinks 55.976     High Low
cufflinks 55.166     High Low
cufflinks 93.542     High High

0 Strain