Gene : Bradi3g20490 B. distachyon v3.1
Defline:  (1 of 5) PF02845 - CUE domain (CUE) Genomic Order:  2624
Name:  ? Bradi3g20490 Secondary Identifier:  ? PAC:32817479
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g20490 0.5kb upstream 0.5kb upstream 4636 true Bd3: 19531922-19536557 Brachypodium distachyon
Bradi3g20490 0.5kb upstream 0.5kb upstream 500 false Bd3: 19536058-19536557 Brachypodium distachyon
Bradi3g20490 0.5kb downstream 0.5kb downstream 4636 true Bd3: 19531422-19536057 Brachypodium distachyon
Bradi3g20490 0.5kb downstream 0.5kb downstream 500 false Bd3: 19531422-19531921 Brachypodium distachyon
Bradi3g20490 1.0kb upstream 1.0kb upstream 5136 true Bd3: 19531922-19537057 Brachypodium distachyon
Bradi3g20490 1.0kb upstream 1.0kb upstream 1000 false Bd3: 19536058-19537057 Brachypodium distachyon
Bradi3g20490 1.0kb downstream 1.0kb downstream 5136 true Bd3: 19530922-19536057 Brachypodium distachyon
Bradi3g20490 1.0kb downstream 1.0kb downstream 1000 false Bd3: 19530922-19531921 Brachypodium distachyon
Bradi3g20490 2.0kb upstream 2.0kb upstream 6136 true Bd3: 19531922-19538057 Brachypodium distachyon
Bradi3g20490 2.0kb upstream 2.0kb upstream 2000 false Bd3: 19536058-19538057 Brachypodium distachyon
Bradi3g20490 2.0kb downstream 2.0kb downstream 6136 true Bd3: 19529922-19536057 Brachypodium distachyon
Bradi3g20490 2.0kb downstream 2.0kb downstream 2000 false Bd3: 19529922-19531921 Brachypodium distachyon
Bradi3g20490 5.0kb upstream 5.0kb upstream 9136 true Bd3: 19531922-19541057 Brachypodium distachyon
Bradi3g20490 5.0kb upstream 5.0kb upstream 5000 false Bd3: 19536058-19541057 Brachypodium distachyon
Bradi3g20490 5.0kb downstream 5.0kb downstream 9136 true Bd3: 19526922-19536057 Brachypodium distachyon
Bradi3g20490 5.0kb downstream 5.0kb downstream 5000 false Bd3: 19526922-19531921 Brachypodium distachyon
Bradi3g20490 10.0kb upstream 10.0kb upstream 14136 true Bd3: 19531922-19546057 Brachypodium distachyon
Bradi3g20490 10.0kb upstream 10.0kb upstream 10000 false Bd3: 19536058-19546057 Brachypodium distachyon
Bradi3g20490 10.0kb downstream 10.0kb downstream 14136 true Bd3: 19521922-19536057 Brachypodium distachyon
Bradi3g20490 10.0kb downstream 10.0kb downstream 10000 false Bd3: 19521922-19531921 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124583138 5269 Grass View MSA
122042927 5273 Angiosperm View MSA
121343800 5274 Embryophyte View MSA
123427997 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.289        
cufflinks 4.316        
cufflinks 5.239       High
cufflinks 3.807        
cufflinks 2.934        
cufflinks 3.221        
cufflinks 3.988        
cufflinks 3.819        
cufflinks 3.059        
cufflinks 3.098        
cufflinks 2.891        
cufflinks 2.749        
cufflinks 2.159       Low
cufflinks 2.677       Low
cufflinks 3.183        
cufflinks 3.871        
cufflinks 3.514        
cufflinks 5.104       High
cufflinks 4.277        
cufflinks 6.016       High
cufflinks 4.513        
cufflinks 4.121        
cufflinks 3.286        
cufflinks 2.831        
cufflinks 3.03        
cufflinks 4.854        
cufflinks 2.584       Low
cufflinks 4.809        
cufflinks 4.241        
cufflinks 3.471        

0 Strain