Gene : Bradi3g20512 B. distachyon v3.1
Defline:  (1 of 56) PF03101//PF10551 - FAR1 DNA-binding domain (FAR1) // MULE transposase domain (MULE) Genomic Order:  2626
Name:  ? Bradi3g20512 Secondary Identifier:  ? PAC:32821484
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g20512 0.5kb upstream 0.5kb upstream 4252 true Bd3: 19549090-19553341 Brachypodium distachyon
Bradi3g20512 0.5kb upstream 0.5kb upstream 500 false Bd3: 19549090-19549589 Brachypodium distachyon
Bradi3g20512 0.5kb downstream 0.5kb downstream 4252 true Bd3: 19549590-19553841 Brachypodium distachyon
Bradi3g20512 0.5kb downstream 0.5kb downstream 500 false Bd3: 19553342-19553841 Brachypodium distachyon
Bradi3g20512 1.0kb upstream 1.0kb upstream 4752 true Bd3: 19548590-19553341 Brachypodium distachyon
Bradi3g20512 1.0kb upstream 1.0kb upstream 1000 false Bd3: 19548590-19549589 Brachypodium distachyon
Bradi3g20512 1.0kb downstream 1.0kb downstream 4752 true Bd3: 19549590-19554341 Brachypodium distachyon
Bradi3g20512 1.0kb downstream 1.0kb downstream 1000 false Bd3: 19553342-19554341 Brachypodium distachyon
Bradi3g20512 2.0kb upstream 2.0kb upstream 5752 true Bd3: 19547590-19553341 Brachypodium distachyon
Bradi3g20512 2.0kb upstream 2.0kb upstream 2000 false Bd3: 19547590-19549589 Brachypodium distachyon
Bradi3g20512 2.0kb downstream 2.0kb downstream 5752 true Bd3: 19549590-19555341 Brachypodium distachyon
Bradi3g20512 2.0kb downstream 2.0kb downstream 2000 false Bd3: 19553342-19555341 Brachypodium distachyon
Bradi3g20512 5.0kb upstream 5.0kb upstream 8752 true Bd3: 19544590-19553341 Brachypodium distachyon
Bradi3g20512 5.0kb upstream 5.0kb upstream 5000 false Bd3: 19544590-19549589 Brachypodium distachyon
Bradi3g20512 5.0kb downstream 5.0kb downstream 8752 true Bd3: 19549590-19558341 Brachypodium distachyon
Bradi3g20512 5.0kb downstream 5.0kb downstream 5000 false Bd3: 19553342-19558341 Brachypodium distachyon
Bradi3g20512 10.0kb upstream 10.0kb upstream 13752 true Bd3: 19539590-19553341 Brachypodium distachyon
Bradi3g20512 10.0kb upstream 10.0kb upstream 10000 false Bd3: 19539590-19549589 Brachypodium distachyon
Bradi3g20512 10.0kb downstream 10.0kb downstream 13752 true Bd3: 19549590-19563341 Brachypodium distachyon
Bradi3g20512 10.0kb downstream 10.0kb downstream 10000 false Bd3: 19553342-19563341 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122031606 5273 Angiosperm View MSA
124589040 5269 Grass View MSA
121300621 5274 Embryophyte View MSA
123338368 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.004     Low Low
cufflinks 0.033     Low  
cufflinks 0.033     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.068     Low High
cufflinks 0.034     Low  
cufflinks 0.024     Low  
cufflinks 0.026     Low  
cufflinks 0.013     Low  
cufflinks 0.008     Low Low
cufflinks 0.014     Low  
cufflinks 0.038     Low  
cufflinks 0.015     Low  
cufflinks 0.012     Low  
cufflinks 0.029     Low  
cufflinks 0.025     Low  
cufflinks 0.023     Low  
cufflinks 0.019     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.019     Low  
cufflinks 0.019     Low  
cufflinks 0.024     Low  
cufflinks 0.02     Low  
cufflinks 0.057     Low High
cufflinks 0.038     Low  
cufflinks 0.025     Low  
cufflinks 0.053     Low High
cufflinks 0.04     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.061     Low High

0 Strain