Gene : Bradi3g21117 B. distachyon v3.1
Defline:  (1 of 1) PTHR11607:SF18 - ALPHA-MANNOSIDASE Genomic Order:  2708
Name:  ? Bradi3g21117 Secondary Identifier:  ? PAC:32815959
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g21117 0.5kb upstream 0.5kb upstream 14381 true Bd3: 20160754-20175134 Brachypodium distachyon
Bradi3g21117 0.5kb upstream 0.5kb upstream 500 false Bd3: 20160754-20161253 Brachypodium distachyon
Bradi3g21117 0.5kb downstream 0.5kb downstream 14381 true Bd3: 20161254-20175634 Brachypodium distachyon
Bradi3g21117 0.5kb downstream 0.5kb downstream 500 false Bd3: 20175135-20175634 Brachypodium distachyon
Bradi3g21117 1.0kb upstream 1.0kb upstream 14881 true Bd3: 20160254-20175134 Brachypodium distachyon
Bradi3g21117 1.0kb upstream 1.0kb upstream 1000 false Bd3: 20160254-20161253 Brachypodium distachyon
Bradi3g21117 1.0kb downstream 1.0kb downstream 14881 true Bd3: 20161254-20176134 Brachypodium distachyon
Bradi3g21117 1.0kb downstream 1.0kb downstream 1000 false Bd3: 20175135-20176134 Brachypodium distachyon
Bradi3g21117 2.0kb upstream 2.0kb upstream 15881 true Bd3: 20159254-20175134 Brachypodium distachyon
Bradi3g21117 2.0kb upstream 2.0kb upstream 2000 false Bd3: 20159254-20161253 Brachypodium distachyon
Bradi3g21117 2.0kb downstream 2.0kb downstream 15881 true Bd3: 20161254-20177134 Brachypodium distachyon
Bradi3g21117 2.0kb downstream 2.0kb downstream 2000 false Bd3: 20175135-20177134 Brachypodium distachyon
Bradi3g21117 5.0kb upstream 5.0kb upstream 18881 true Bd3: 20156254-20175134 Brachypodium distachyon
Bradi3g21117 5.0kb upstream 5.0kb upstream 5000 false Bd3: 20156254-20161253 Brachypodium distachyon
Bradi3g21117 5.0kb downstream 5.0kb downstream 18881 true Bd3: 20161254-20180134 Brachypodium distachyon
Bradi3g21117 5.0kb downstream 5.0kb downstream 5000 false Bd3: 20175135-20180134 Brachypodium distachyon
Bradi3g21117 10.0kb upstream 10.0kb upstream 23881 true Bd3: 20151254-20175134 Brachypodium distachyon
Bradi3g21117 10.0kb upstream 10.0kb upstream 10000 false Bd3: 20151254-20161253 Brachypodium distachyon
Bradi3g21117 10.0kb downstream 10.0kb downstream 23881 true Bd3: 20161254-20185134 Brachypodium distachyon
Bradi3g21117 10.0kb downstream 10.0kb downstream 10000 false Bd3: 20175135-20185134 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124568995 5269 Grass View MSA
122044684 5273 Angiosperm View MSA
121351343 5274 Embryophyte View MSA
123424648 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.462        
cufflinks 4.804       High
cufflinks 4.693        
cufflinks 3.8        
cufflinks 1.673       Low
cufflinks 4.213        
cufflinks 3.564        
cufflinks 3.637        
cufflinks 3.747        
cufflinks 3.814        
cufflinks 4.387        
cufflinks 4.252        
cufflinks 2.942        
cufflinks 3.123        
cufflinks 2.975        
cufflinks 4.384        
cufflinks 2.981        
cufflinks 4.161        
cufflinks 2.476        
cufflinks 1.087       Low
cufflinks 1.895       Low
cufflinks 5.415       High
cufflinks 3.162        
cufflinks 3.258        
cufflinks 2.99        
cufflinks 4.57        
cufflinks 3.821        
cufflinks 4.141        
cufflinks 4.617        
cufflinks 3.979        

0 Strain