Gene : Bradi3g22030 B. distachyon v3.1
Defline:  (1 of 1) PF11016 - Protein of unknown function (DUF2854) (DUF2854) Genomic Order:  2818
Name:  ? Bradi3g22030 Secondary Identifier:  ? PAC:32820107
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g22030 0.5kb upstream 0.5kb upstream 9676 true Bd3: 21164888-21174563 Brachypodium distachyon
Bradi3g22030 0.5kb upstream 0.5kb upstream 500 false Bd3: 21174064-21174563 Brachypodium distachyon
Bradi3g22030 0.5kb downstream 0.5kb downstream 9676 true Bd3: 21164388-21174063 Brachypodium distachyon
Bradi3g22030 0.5kb downstream 0.5kb downstream 500 false Bd3: 21164388-21164887 Brachypodium distachyon
Bradi3g22030 1.0kb upstream 1.0kb upstream 10176 true Bd3: 21164888-21175063 Brachypodium distachyon
Bradi3g22030 1.0kb upstream 1.0kb upstream 1000 false Bd3: 21174064-21175063 Brachypodium distachyon
Bradi3g22030 1.0kb downstream 1.0kb downstream 10176 true Bd3: 21163888-21174063 Brachypodium distachyon
Bradi3g22030 1.0kb downstream 1.0kb downstream 1000 false Bd3: 21163888-21164887 Brachypodium distachyon
Bradi3g22030 2.0kb upstream 2.0kb upstream 11176 true Bd3: 21164888-21176063 Brachypodium distachyon
Bradi3g22030 2.0kb upstream 2.0kb upstream 2000 false Bd3: 21174064-21176063 Brachypodium distachyon
Bradi3g22030 2.0kb downstream 2.0kb downstream 11176 true Bd3: 21162888-21174063 Brachypodium distachyon
Bradi3g22030 2.0kb downstream 2.0kb downstream 2000 false Bd3: 21162888-21164887 Brachypodium distachyon
Bradi3g22030 5.0kb upstream 5.0kb upstream 14176 true Bd3: 21164888-21179063 Brachypodium distachyon
Bradi3g22030 5.0kb upstream 5.0kb upstream 5000 false Bd3: 21174064-21179063 Brachypodium distachyon
Bradi3g22030 5.0kb downstream 5.0kb downstream 14176 true Bd3: 21159888-21174063 Brachypodium distachyon
Bradi3g22030 5.0kb downstream 5.0kb downstream 5000 false Bd3: 21159888-21164887 Brachypodium distachyon
Bradi3g22030 10.0kb upstream 10.0kb upstream 19176 true Bd3: 21164888-21184063 Brachypodium distachyon
Bradi3g22030 10.0kb upstream 10.0kb upstream 10000 false Bd3: 21174064-21184063 Brachypodium distachyon
Bradi3g22030 10.0kb downstream 10.0kb downstream 19176 true Bd3: 21154888-21174063 Brachypodium distachyon
Bradi3g22030 10.0kb downstream 10.0kb downstream 10000 false Bd3: 21154888-21164887 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124585261 5269 Grass View MSA
122043202 5273 Angiosperm View MSA
121344662 5274 Embryophyte View MSA
123425067 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.291     High  
cufflinks 15.14     High  
cufflinks 16.03     High  
cufflinks 16.674     High  
cufflinks 17.314     High  
cufflinks 13.517     High  
cufflinks 14.833     High  
cufflinks 14.284     High  
cufflinks 13.702     High  
cufflinks 17.212     High  
cufflinks 29.525     High High
cufflinks 12.278     High  
cufflinks 21.634     High  
cufflinks 31.389     High High
cufflinks 16.025     High  
cufflinks 15.748     High  
cufflinks 18.801     High  
cufflinks 0.942       Low
cufflinks 17.715     High  
cufflinks 13.397     High  
cufflinks 8.354        
cufflinks 13.956     High  
cufflinks 16.317     High  
cufflinks 17.017     High  
cufflinks 18.345     High  
cufflinks 18.137     High  
cufflinks 24.181     High  
cufflinks 16.229     High  
cufflinks 15.561     High  
cufflinks 5.632       Low

0 Strain