Gene : Bradi4g37990 B. distachyon v3.1
Defline:  (1 of 1) KOG2362 - Uncharacterized Fe-S protein Genomic Order:  4905
Name:  ? Bradi4g37990 Secondary Identifier:  ? PAC:32790845
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY-5963 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g37990 0.5kb upstream 0.5kb upstream 4587 true Bd4: 42909454-42914040 Brachypodium distachyon
Bradi4g37990 0.5kb upstream 0.5kb upstream 500 false Bd4: 42909454-42909953 Brachypodium distachyon
Bradi4g37990 0.5kb downstream 0.5kb downstream 4587 true Bd4: 42909954-42914540 Brachypodium distachyon
Bradi4g37990 0.5kb downstream 0.5kb downstream 500 false Bd4: 42914041-42914540 Brachypodium distachyon
Bradi4g37990 1.0kb upstream 1.0kb upstream 5087 true Bd4: 42908954-42914040 Brachypodium distachyon
Bradi4g37990 1.0kb upstream 1.0kb upstream 1000 false Bd4: 42908954-42909953 Brachypodium distachyon
Bradi4g37990 1.0kb downstream 1.0kb downstream 5087 true Bd4: 42909954-42915040 Brachypodium distachyon
Bradi4g37990 1.0kb downstream 1.0kb downstream 1000 false Bd4: 42914041-42915040 Brachypodium distachyon
Bradi4g37990 2.0kb upstream 2.0kb upstream 6087 true Bd4: 42907954-42914040 Brachypodium distachyon
Bradi4g37990 2.0kb upstream 2.0kb upstream 2000 false Bd4: 42907954-42909953 Brachypodium distachyon
Bradi4g37990 2.0kb downstream 2.0kb downstream 6087 true Bd4: 42909954-42916040 Brachypodium distachyon
Bradi4g37990 2.0kb downstream 2.0kb downstream 2000 false Bd4: 42914041-42916040 Brachypodium distachyon
Bradi4g37990 5.0kb upstream 5.0kb upstream 9087 true Bd4: 42904954-42914040 Brachypodium distachyon
Bradi4g37990 5.0kb upstream 5.0kb upstream 5000 false Bd4: 42904954-42909953 Brachypodium distachyon
Bradi4g37990 5.0kb downstream 5.0kb downstream 9087 true Bd4: 42909954-42919040 Brachypodium distachyon
Bradi4g37990 5.0kb downstream 5.0kb downstream 5000 false Bd4: 42914041-42919040 Brachypodium distachyon
Bradi4g37990 10.0kb upstream 10.0kb upstream 14087 true Bd4: 42899954-42914040 Brachypodium distachyon
Bradi4g37990 10.0kb upstream 10.0kb upstream 10000 false Bd4: 42899954-42909953 Brachypodium distachyon
Bradi4g37990 10.0kb downstream 10.0kb downstream 14087 true Bd4: 42909954-42924040 Brachypodium distachyon
Bradi4g37990 10.0kb downstream 10.0kb downstream 10000 false Bd4: 42914041-42924040 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124575993 5269 Grass View MSA
122043484 5273 Angiosperm View MSA
123428941 5275 Viridiplantae View MSA
121347613 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.914       Low
cufflinks 12.408     High  
cufflinks 18.162     High High
cufflinks 14.7     High  
cufflinks 6.742        
cufflinks 7.026        
cufflinks 8.92        
cufflinks 7.167        
cufflinks 6.98        
cufflinks 15.589     High High
cufflinks 11.502     High  
cufflinks 7.272        
cufflinks 8.158     High  
cufflinks 10.064     High  
cufflinks 6.188       Low
cufflinks 6.569        
cufflinks 11.019     High  
cufflinks 8.283        
cufflinks 16.526     High High
cufflinks 3.283       Low
cufflinks 12.124     High  
cufflinks 16.017     High High
cufflinks 7.257        
cufflinks 7.009        
cufflinks 7.058        
cufflinks 19.53     High High
cufflinks 18.19     High High
cufflinks 19.56     High High
cufflinks 16.171     High High
cufflinks 7.539        

0 Strain