Gene : Bradi3g28907 B. distachyon v3.1
Defline:  (1 of 2) PTHR12388 - MITOCHONDRIA ASSOCIATED GRANULOCYTE MACROPHAGE CSF SIGNALING MOLECULE Genomic Order:  3474
Name:  ? Bradi3g28907 Secondary Identifier:  ? PAC:32814671
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g28907 0.5kb upstream 0.5kb upstream 8623 true Bd3: 30414594-30423216 Brachypodium distachyon
Bradi3g28907 0.5kb upstream 0.5kb upstream 500 false Bd3: 30414594-30415093 Brachypodium distachyon
Bradi3g28907 0.5kb downstream 0.5kb downstream 8623 true Bd3: 30415094-30423716 Brachypodium distachyon
Bradi3g28907 0.5kb downstream 0.5kb downstream 500 false Bd3: 30423217-30423716 Brachypodium distachyon
Bradi3g28907 1.0kb upstream 1.0kb upstream 9123 true Bd3: 30414094-30423216 Brachypodium distachyon
Bradi3g28907 1.0kb upstream 1.0kb upstream 1000 false Bd3: 30414094-30415093 Brachypodium distachyon
Bradi3g28907 1.0kb downstream 1.0kb downstream 9123 true Bd3: 30415094-30424216 Brachypodium distachyon
Bradi3g28907 1.0kb downstream 1.0kb downstream 1000 false Bd3: 30423217-30424216 Brachypodium distachyon
Bradi3g28907 2.0kb upstream 2.0kb upstream 10123 true Bd3: 30413094-30423216 Brachypodium distachyon
Bradi3g28907 2.0kb upstream 2.0kb upstream 2000 false Bd3: 30413094-30415093 Brachypodium distachyon
Bradi3g28907 2.0kb downstream 2.0kb downstream 10123 true Bd3: 30415094-30425216 Brachypodium distachyon
Bradi3g28907 2.0kb downstream 2.0kb downstream 2000 false Bd3: 30423217-30425216 Brachypodium distachyon
Bradi3g28907 5.0kb upstream 5.0kb upstream 13123 true Bd3: 30410094-30423216 Brachypodium distachyon
Bradi3g28907 5.0kb upstream 5.0kb upstream 5000 false Bd3: 30410094-30415093 Brachypodium distachyon
Bradi3g28907 5.0kb downstream 5.0kb downstream 13123 true Bd3: 30415094-30428216 Brachypodium distachyon
Bradi3g28907 5.0kb downstream 5.0kb downstream 5000 false Bd3: 30423217-30428216 Brachypodium distachyon
Bradi3g28907 10.0kb upstream 10.0kb upstream 18123 true Bd3: 30405094-30423216 Brachypodium distachyon
Bradi3g28907 10.0kb upstream 10.0kb upstream 10000 false Bd3: 30405094-30415093 Brachypodium distachyon
Bradi3g28907 10.0kb downstream 10.0kb downstream 18123 true Bd3: 30415094-30433216 Brachypodium distachyon
Bradi3g28907 10.0kb downstream 10.0kb downstream 10000 false Bd3: 30423217-30433216 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124573797 5269 Grass View MSA
122051009 5273 Angiosperm View MSA
121349876 5274 Embryophyte View MSA
123426047 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.477        
cufflinks 2.439        
cufflinks 2.837        
cufflinks 2.651        
cufflinks 3.403        
cufflinks 2.214        
cufflinks 2.523        
cufflinks 2.165       Low
cufflinks 2.104       Low
cufflinks 3.769        
cufflinks 3.533        
cufflinks 1.811       Low
cufflinks 2.443        
cufflinks 3.32        
cufflinks 2.451        
cufflinks 2.045       Low
cufflinks 4.484       High
cufflinks 1.758       Low
cufflinks 7.755       High
cufflinks 4.401       High
cufflinks 4.877       High
cufflinks 2.93        
cufflinks 2.427        
cufflinks 2.366        
cufflinks 2.639        
cufflinks 3.802        
cufflinks 3.534        
cufflinks 4.056        
cufflinks 3.329        
cufflinks 2.202        

0 Strain