Gene : Bradi3g29390 B. distachyon v3.1
Defline:  (1 of 1) K10867 - nijmegen breakage syndrome protein 1 (NBN, NBS1) Genomic Order:  3540
Name:  ? Bradi3g29390 Secondary Identifier:  ? PAC:32821492
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g29390 0.5kb upstream 0.5kb upstream 5761 true Bd3: 31164364-31170124 Brachypodium distachyon
Bradi3g29390 0.5kb upstream 0.5kb upstream 500 false Bd3: 31164364-31164863 Brachypodium distachyon
Bradi3g29390 0.5kb downstream 0.5kb downstream 5761 true Bd3: 31164864-31170624 Brachypodium distachyon
Bradi3g29390 0.5kb downstream 0.5kb downstream 500 false Bd3: 31170125-31170624 Brachypodium distachyon
Bradi3g29390 1.0kb upstream 1.0kb upstream 6261 true Bd3: 31163864-31170124 Brachypodium distachyon
Bradi3g29390 1.0kb upstream 1.0kb upstream 1000 false Bd3: 31163864-31164863 Brachypodium distachyon
Bradi3g29390 1.0kb downstream 1.0kb downstream 6261 true Bd3: 31164864-31171124 Brachypodium distachyon
Bradi3g29390 1.0kb downstream 1.0kb downstream 1000 false Bd3: 31170125-31171124 Brachypodium distachyon
Bradi3g29390 2.0kb upstream 2.0kb upstream 7261 true Bd3: 31162864-31170124 Brachypodium distachyon
Bradi3g29390 2.0kb upstream 2.0kb upstream 2000 false Bd3: 31162864-31164863 Brachypodium distachyon
Bradi3g29390 2.0kb downstream 2.0kb downstream 7261 true Bd3: 31164864-31172124 Brachypodium distachyon
Bradi3g29390 2.0kb downstream 2.0kb downstream 2000 false Bd3: 31170125-31172124 Brachypodium distachyon
Bradi3g29390 5.0kb upstream 5.0kb upstream 10261 true Bd3: 31159864-31170124 Brachypodium distachyon
Bradi3g29390 5.0kb upstream 5.0kb upstream 5000 false Bd3: 31159864-31164863 Brachypodium distachyon
Bradi3g29390 5.0kb downstream 5.0kb downstream 10261 true Bd3: 31164864-31175124 Brachypodium distachyon
Bradi3g29390 5.0kb downstream 5.0kb downstream 5000 false Bd3: 31170125-31175124 Brachypodium distachyon
Bradi3g29390 10.0kb upstream 10.0kb upstream 15261 true Bd3: 31154864-31170124 Brachypodium distachyon
Bradi3g29390 10.0kb upstream 10.0kb upstream 10000 false Bd3: 31154864-31164863 Brachypodium distachyon
Bradi3g29390 10.0kb downstream 10.0kb downstream 15261 true Bd3: 31164864-31180124 Brachypodium distachyon
Bradi3g29390 10.0kb downstream 10.0kb downstream 10000 false Bd3: 31170125-31180124 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124571874 5269 Grass View MSA
122047101 5273 Angiosperm View MSA
121349305 5274 Embryophyte View MSA
123381266 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.712        
cufflinks 1.23        
cufflinks 1.318        
cufflinks 1.102        
cufflinks 0.563       Low
cufflinks 1.01        
cufflinks 1.088        
cufflinks 0.775        
cufflinks 1.007        
cufflinks 0.811        
cufflinks 0.943        
cufflinks 0.9        
cufflinks 0.694        
cufflinks 0.549       Low
cufflinks 0.594       Low
cufflinks 0.996        
cufflinks 0.69        
cufflinks 2.225       High
cufflinks 2.501       High
cufflinks 1.201        
cufflinks 1.477        
cufflinks 1.099        
cufflinks 0.859        
cufflinks 0.715        
cufflinks 1.198        
cufflinks 1.408        
cufflinks 0.903        
cufflinks 1.169        
cufflinks 1.107        
cufflinks 1.359        

0 Strain