Gene : Bradi3g29722 B. distachyon v3.1
Defline:  (1 of 3) PF04450 - Peptidase of plants and bacteria (BSP) Genomic Order:  3587
Name:  ? Bradi3g29722 Secondary Identifier:  ? PAC:32818385
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g29722 0.5kb upstream 0.5kb upstream 1401 true Bd3: 31520920-31522320 Brachypodium distachyon
Bradi3g29722 0.5kb upstream 0.5kb upstream 500 false Bd3: 31521821-31522320 Brachypodium distachyon
Bradi3g29722 0.5kb downstream 0.5kb downstream 1401 true Bd3: 31520420-31521820 Brachypodium distachyon
Bradi3g29722 0.5kb downstream 0.5kb downstream 500 false Bd3: 31520420-31520919 Brachypodium distachyon
Bradi3g29722 1.0kb upstream 1.0kb upstream 1901 true Bd3: 31520920-31522820 Brachypodium distachyon
Bradi3g29722 1.0kb upstream 1.0kb upstream 1000 false Bd3: 31521821-31522820 Brachypodium distachyon
Bradi3g29722 1.0kb downstream 1.0kb downstream 1901 true Bd3: 31519920-31521820 Brachypodium distachyon
Bradi3g29722 1.0kb downstream 1.0kb downstream 1000 false Bd3: 31519920-31520919 Brachypodium distachyon
Bradi3g29722 2.0kb upstream 2.0kb upstream 2901 true Bd3: 31520920-31523820 Brachypodium distachyon
Bradi3g29722 2.0kb upstream 2.0kb upstream 2000 false Bd3: 31521821-31523820 Brachypodium distachyon
Bradi3g29722 2.0kb downstream 2.0kb downstream 2901 true Bd3: 31518920-31521820 Brachypodium distachyon
Bradi3g29722 2.0kb downstream 2.0kb downstream 2000 false Bd3: 31518920-31520919 Brachypodium distachyon
Bradi3g29722 5.0kb upstream 5.0kb upstream 5901 true Bd3: 31520920-31526820 Brachypodium distachyon
Bradi3g29722 5.0kb upstream 5.0kb upstream 5000 false Bd3: 31521821-31526820 Brachypodium distachyon
Bradi3g29722 5.0kb downstream 5.0kb downstream 5901 true Bd3: 31515920-31521820 Brachypodium distachyon
Bradi3g29722 5.0kb downstream 5.0kb downstream 5000 false Bd3: 31515920-31520919 Brachypodium distachyon
Bradi3g29722 10.0kb upstream 10.0kb upstream 10901 true Bd3: 31520920-31531820 Brachypodium distachyon
Bradi3g29722 10.0kb upstream 10.0kb upstream 10000 false Bd3: 31521821-31531820 Brachypodium distachyon
Bradi3g29722 10.0kb downstream 10.0kb downstream 10901 true Bd3: 31510920-31521820 Brachypodium distachyon
Bradi3g29722 10.0kb downstream 10.0kb downstream 10000 false Bd3: 31510920-31520919 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124585877 5269 Grass View MSA
122049150 5273 Angiosperm View MSA
121350945 5274 Embryophyte View MSA
123381943 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 27.877     High  
cufflinks 4.752        
cufflinks 4.966        
cufflinks 5.207        
cufflinks 20.871     High  
cufflinks 6.037        
cufflinks 5.863        
cufflinks 5.661        
cufflinks 4.225        
cufflinks 7.154        
cufflinks 31.191     High High
cufflinks 6.05        
cufflinks 3.304       Low
cufflinks 9.885     High  
cufflinks 41.48     High High
cufflinks 10.353     High  
cufflinks 36.979     High High
cufflinks 6.617        
cufflinks 63.994     High High
cufflinks 46.148     High High
cufflinks 2.441       Low
cufflinks 3.736        
cufflinks 5.457        
cufflinks 6.017        
cufflinks 4.557        
cufflinks 5.133        
cufflinks 1.881       Low
cufflinks 4.634        
cufflinks 5.01        
cufflinks 2.137       Low

0 Strain