Gene : Bradi3g29780 B. distachyon v3.1
Defline:  (1 of 1) PTHR19139//PTHR19139:SF132 - AQUAPORIN TRANSPORTER // SUBFAMILY NOT NAMED Genomic Order:  3592
Name:  ? Bradi3g29780 Secondary Identifier:  ? PAC:32819705
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g29780 0.5kb upstream 0.5kb upstream 2166 true Bd3: 31567466-31569631 Brachypodium distachyon
Bradi3g29780 0.5kb upstream 0.5kb upstream 500 false Bd3: 31567466-31567965 Brachypodium distachyon
Bradi3g29780 0.5kb downstream 0.5kb downstream 2166 true Bd3: 31567966-31570131 Brachypodium distachyon
Bradi3g29780 0.5kb downstream 0.5kb downstream 500 false Bd3: 31569632-31570131 Brachypodium distachyon
Bradi3g29780 1.0kb upstream 1.0kb upstream 2666 true Bd3: 31566966-31569631 Brachypodium distachyon
Bradi3g29780 1.0kb upstream 1.0kb upstream 1000 false Bd3: 31566966-31567965 Brachypodium distachyon
Bradi3g29780 1.0kb downstream 1.0kb downstream 2666 true Bd3: 31567966-31570631 Brachypodium distachyon
Bradi3g29780 1.0kb downstream 1.0kb downstream 1000 false Bd3: 31569632-31570631 Brachypodium distachyon
Bradi3g29780 2.0kb upstream 2.0kb upstream 3666 true Bd3: 31565966-31569631 Brachypodium distachyon
Bradi3g29780 2.0kb upstream 2.0kb upstream 2000 false Bd3: 31565966-31567965 Brachypodium distachyon
Bradi3g29780 2.0kb downstream 2.0kb downstream 3666 true Bd3: 31567966-31571631 Brachypodium distachyon
Bradi3g29780 2.0kb downstream 2.0kb downstream 2000 false Bd3: 31569632-31571631 Brachypodium distachyon
Bradi3g29780 5.0kb upstream 5.0kb upstream 6666 true Bd3: 31562966-31569631 Brachypodium distachyon
Bradi3g29780 5.0kb upstream 5.0kb upstream 5000 false Bd3: 31562966-31567965 Brachypodium distachyon
Bradi3g29780 5.0kb downstream 5.0kb downstream 6666 true Bd3: 31567966-31574631 Brachypodium distachyon
Bradi3g29780 5.0kb downstream 5.0kb downstream 5000 false Bd3: 31569632-31574631 Brachypodium distachyon
Bradi3g29780 10.0kb upstream 10.0kb upstream 11666 true Bd3: 31557966-31569631 Brachypodium distachyon
Bradi3g29780 10.0kb upstream 10.0kb upstream 10000 false Bd3: 31557966-31567965 Brachypodium distachyon
Bradi3g29780 10.0kb downstream 10.0kb downstream 11666 true Bd3: 31567966-31579631 Brachypodium distachyon
Bradi3g29780 10.0kb downstream 10.0kb downstream 10000 false Bd3: 31569632-31579631 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124580429 5269 Grass View MSA
122044234 5273 Angiosperm View MSA
121351438 5274 Embryophyte View MSA
123428679 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.048     Low  
cufflinks 0.01     Low Low
cufflinks 0.23        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.018     Low  
cufflinks 0.028     Low  
cufflinks 0.045     Low  
cufflinks 0.059     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.03     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.01     Low Low
cufflinks 0.012     Low Low
cufflinks 0.026     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.637       High
cufflinks 35.757     High High
cufflinks 0.432        
cufflinks 0.038     Low  
cufflinks 0.033     Low  
cufflinks 0.027     Low  
cufflinks 0.088     Low  
cufflinks 0.091     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.099     Low  
cufflinks 0.042     Low  
cufflinks 0.248        

0 Strain