Gene : Bradi3g30080 B. distachyon v3.1
Defline:  (1 of 1) PTHR10293//PTHR10293:SF40 - GLUTAREDOXIN-RELATED PROTEIN // GLUTAREDOXIN-3 Genomic Order:  3628
Name:  ? Bradi3g30080 Secondary Identifier:  ? PAC:32813039
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g30080 0.5kb upstream 0.5kb upstream 4434 true Bd3: 31830917-31835350 Brachypodium distachyon
Bradi3g30080 0.5kb upstream 0.5kb upstream 500 false Bd3: 31830917-31831416 Brachypodium distachyon
Bradi3g30080 0.5kb downstream 0.5kb downstream 4434 true Bd3: 31831417-31835850 Brachypodium distachyon
Bradi3g30080 0.5kb downstream 0.5kb downstream 500 false Bd3: 31835351-31835850 Brachypodium distachyon
Bradi3g30080 1.0kb upstream 1.0kb upstream 4934 true Bd3: 31830417-31835350 Brachypodium distachyon
Bradi3g30080 1.0kb upstream 1.0kb upstream 1000 false Bd3: 31830417-31831416 Brachypodium distachyon
Bradi3g30080 1.0kb downstream 1.0kb downstream 4934 true Bd3: 31831417-31836350 Brachypodium distachyon
Bradi3g30080 1.0kb downstream 1.0kb downstream 1000 false Bd3: 31835351-31836350 Brachypodium distachyon
Bradi3g30080 2.0kb upstream 2.0kb upstream 5934 true Bd3: 31829417-31835350 Brachypodium distachyon
Bradi3g30080 2.0kb upstream 2.0kb upstream 2000 false Bd3: 31829417-31831416 Brachypodium distachyon
Bradi3g30080 2.0kb downstream 2.0kb downstream 5934 true Bd3: 31831417-31837350 Brachypodium distachyon
Bradi3g30080 2.0kb downstream 2.0kb downstream 2000 false Bd3: 31835351-31837350 Brachypodium distachyon
Bradi3g30080 5.0kb upstream 5.0kb upstream 8934 true Bd3: 31826417-31835350 Brachypodium distachyon
Bradi3g30080 5.0kb upstream 5.0kb upstream 5000 false Bd3: 31826417-31831416 Brachypodium distachyon
Bradi3g30080 5.0kb downstream 5.0kb downstream 8934 true Bd3: 31831417-31840350 Brachypodium distachyon
Bradi3g30080 5.0kb downstream 5.0kb downstream 5000 false Bd3: 31835351-31840350 Brachypodium distachyon
Bradi3g30080 10.0kb upstream 10.0kb upstream 13934 true Bd3: 31821417-31835350 Brachypodium distachyon
Bradi3g30080 10.0kb upstream 10.0kb upstream 10000 false Bd3: 31821417-31831416 Brachypodium distachyon
Bradi3g30080 10.0kb downstream 10.0kb downstream 13934 true Bd3: 31831417-31845350 Brachypodium distachyon
Bradi3g30080 10.0kb downstream 10.0kb downstream 10000 false Bd3: 31835351-31845350 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040872 5273 Angiosperm View MSA
124573731 5269 Grass View MSA
121349361 5274 Embryophyte View MSA
123428692 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.038     High Low
cufflinks 22.652     High  
cufflinks 21.311     High  
cufflinks 23.95     High  
cufflinks 25.731     High  
cufflinks 20.312     High  
cufflinks 19.633     High  
cufflinks 24.487     High  
cufflinks 19.905     High  
cufflinks 19.426     High  
cufflinks 17.268     High  
cufflinks 25.875     High  
cufflinks 16.013     High Low
cufflinks 15.501     High Low
cufflinks 20.204     High  
cufflinks 19.357     High  
cufflinks 21.872     High  
cufflinks 32.704     High High
cufflinks 22.759     High  
cufflinks 23.072     High  
cufflinks 24.295     High  
cufflinks 22.919     High  
cufflinks 25.569     High  
cufflinks 21.28     High  
cufflinks 19.382     High  
cufflinks 20.953     High  
cufflinks 16.311     High Low
cufflinks 20.327     High  
cufflinks 21.296     High  
cufflinks 27.11     High  

0 Strain