Gene : Bradi3g29960 B. distachyon v3.1
Defline:  (1 of 1) PTHR12736 - LANC-LIKE PROTEIN Genomic Order:  3614
Name:  ? Bradi3g29960 Secondary Identifier:  ? PAC:32820589
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g29960 0.5kb upstream 0.5kb upstream 4543 true Bd3: 31743811-31748353 Brachypodium distachyon
Bradi3g29960 0.5kb upstream 0.5kb upstream 500 false Bd3: 31743811-31744310 Brachypodium distachyon
Bradi3g29960 0.5kb downstream 0.5kb downstream 4543 true Bd3: 31744311-31748853 Brachypodium distachyon
Bradi3g29960 0.5kb downstream 0.5kb downstream 500 false Bd3: 31748354-31748853 Brachypodium distachyon
Bradi3g29960 1.0kb upstream 1.0kb upstream 5043 true Bd3: 31743311-31748353 Brachypodium distachyon
Bradi3g29960 1.0kb upstream 1.0kb upstream 1000 false Bd3: 31743311-31744310 Brachypodium distachyon
Bradi3g29960 1.0kb downstream 1.0kb downstream 5043 true Bd3: 31744311-31749353 Brachypodium distachyon
Bradi3g29960 1.0kb downstream 1.0kb downstream 1000 false Bd3: 31748354-31749353 Brachypodium distachyon
Bradi3g29960 2.0kb upstream 2.0kb upstream 6043 true Bd3: 31742311-31748353 Brachypodium distachyon
Bradi3g29960 2.0kb upstream 2.0kb upstream 2000 false Bd3: 31742311-31744310 Brachypodium distachyon
Bradi3g29960 2.0kb downstream 2.0kb downstream 6043 true Bd3: 31744311-31750353 Brachypodium distachyon
Bradi3g29960 2.0kb downstream 2.0kb downstream 2000 false Bd3: 31748354-31750353 Brachypodium distachyon
Bradi3g29960 5.0kb upstream 5.0kb upstream 9043 true Bd3: 31739311-31748353 Brachypodium distachyon
Bradi3g29960 5.0kb upstream 5.0kb upstream 5000 false Bd3: 31739311-31744310 Brachypodium distachyon
Bradi3g29960 5.0kb downstream 5.0kb downstream 9043 true Bd3: 31744311-31753353 Brachypodium distachyon
Bradi3g29960 5.0kb downstream 5.0kb downstream 5000 false Bd3: 31748354-31753353 Brachypodium distachyon
Bradi3g29960 10.0kb upstream 10.0kb upstream 14043 true Bd3: 31734311-31748353 Brachypodium distachyon
Bradi3g29960 10.0kb upstream 10.0kb upstream 10000 false Bd3: 31734311-31744310 Brachypodium distachyon
Bradi3g29960 10.0kb downstream 10.0kb downstream 14043 true Bd3: 31744311-31758353 Brachypodium distachyon
Bradi3g29960 10.0kb downstream 10.0kb downstream 10000 false Bd3: 31748354-31758353 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124572188 5269 Grass View MSA
122042680 5273 Angiosperm View MSA
121348546 5274 Embryophyte View MSA
123425935 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.201       Low
cufflinks 0.605        
cufflinks 0.455        
cufflinks 0.584        
cufflinks 0.466        
cufflinks 0.372        
cufflinks 0.448        
cufflinks 0.301        
cufflinks 0.262        
cufflinks 0.323        
cufflinks 0.236        
cufflinks 0.26        
cufflinks 0.132       Low
cufflinks 0.172       Low
cufflinks 0.172       Low
cufflinks 0.313        
cufflinks 0.463        
cufflinks 0.85       High
cufflinks 0.848       High
cufflinks 0.61        
cufflinks 0.811       High
cufflinks 0.369        
cufflinks 0.268        
cufflinks 0.246        
cufflinks 0.378        
cufflinks 0.601        
cufflinks 0.496        
cufflinks 0.417        
cufflinks 0.396        
cufflinks 0.452        

0 Strain