Gene : Bradi3g30115 B. distachyon v3.1
Genomic Order:  3636 Name:  ? Bradi3g30115
Secondary Identifier:  ? PAC:32814031
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g30115 0.5kb upstream 0.5kb upstream 1437 true Bd3: 31886343-31887779 Brachypodium distachyon
Bradi3g30115 0.5kb upstream 0.5kb upstream 500 false Bd3: 31887280-31887779 Brachypodium distachyon
Bradi3g30115 0.5kb downstream 0.5kb downstream 1437 true Bd3: 31885843-31887279 Brachypodium distachyon
Bradi3g30115 0.5kb downstream 0.5kb downstream 500 false Bd3: 31885843-31886342 Brachypodium distachyon
Bradi3g30115 1.0kb upstream 1.0kb upstream 1937 true Bd3: 31886343-31888279 Brachypodium distachyon
Bradi3g30115 1.0kb upstream 1.0kb upstream 1000 false Bd3: 31887280-31888279 Brachypodium distachyon
Bradi3g30115 1.0kb downstream 1.0kb downstream 1937 true Bd3: 31885343-31887279 Brachypodium distachyon
Bradi3g30115 1.0kb downstream 1.0kb downstream 1000 false Bd3: 31885343-31886342 Brachypodium distachyon
Bradi3g30115 2.0kb upstream 2.0kb upstream 2937 true Bd3: 31886343-31889279 Brachypodium distachyon
Bradi3g30115 2.0kb upstream 2.0kb upstream 2000 false Bd3: 31887280-31889279 Brachypodium distachyon
Bradi3g30115 2.0kb downstream 2.0kb downstream 2937 true Bd3: 31884343-31887279 Brachypodium distachyon
Bradi3g30115 2.0kb downstream 2.0kb downstream 2000 false Bd3: 31884343-31886342 Brachypodium distachyon
Bradi3g30115 5.0kb upstream 5.0kb upstream 5937 true Bd3: 31886343-31892279 Brachypodium distachyon
Bradi3g30115 5.0kb upstream 5.0kb upstream 5000 false Bd3: 31887280-31892279 Brachypodium distachyon
Bradi3g30115 5.0kb downstream 5.0kb downstream 5937 true Bd3: 31881343-31887279 Brachypodium distachyon
Bradi3g30115 5.0kb downstream 5.0kb downstream 5000 false Bd3: 31881343-31886342 Brachypodium distachyon
Bradi3g30115 10.0kb upstream 10.0kb upstream 10937 true Bd3: 31886343-31897279 Brachypodium distachyon
Bradi3g30115 10.0kb upstream 10.0kb upstream 10000 false Bd3: 31887280-31897279 Brachypodium distachyon
Bradi3g30115 10.0kb downstream 10.0kb downstream 10937 true Bd3: 31876343-31887279 Brachypodium distachyon
Bradi3g30115 10.0kb downstream 10.0kb downstream 10000 false Bd3: 31876343-31886342 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121899494 5273 Angiosperm Singleton cluster - no MSA
124472408 5269 Grass Singleton cluster - no MSA
121170018 5274 Embryophyte Singleton cluster - no MSA
123208898 5275 Viridiplantae Singleton cluster - no MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.019     Low Low
cufflinks 0.052     Low  
cufflinks 0.014     Low Low
cufflinks 0.111        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.084     Low  
cufflinks 0.071     Low  
cufflinks 0.013     Low Low
cufflinks 0.081     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.037     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.02     Low Low
cufflinks 0.085     Low  
cufflinks 0.162     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.025     Low  
cufflinks 0.126       High
cufflinks 0.085     Low  
cufflinks 0.049     Low  
cufflinks 0.048     Low  
cufflinks 0.035     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.014     Low Low
cufflinks 0.052     Low  

0 Strain