Gene : Bradi3g30400 B. distachyon v3.1
Defline:  (1 of 6) PF04859 - Plant protein of unknown function (DUF641) (DUF641) Genomic Order:  3679
Name:  ? Bradi3g30400 Secondary Identifier:  ? PAC:32815319
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g30400 0.5kb upstream 0.5kb upstream 3210 true Bd3: 32260016-32263225 Brachypodium distachyon
Bradi3g30400 0.5kb upstream 0.5kb upstream 500 false Bd3: 32260016-32260515 Brachypodium distachyon
Bradi3g30400 0.5kb downstream 0.5kb downstream 3210 true Bd3: 32260516-32263725 Brachypodium distachyon
Bradi3g30400 0.5kb downstream 0.5kb downstream 500 false Bd3: 32263226-32263725 Brachypodium distachyon
Bradi3g30400 1.0kb upstream 1.0kb upstream 3710 true Bd3: 32259516-32263225 Brachypodium distachyon
Bradi3g30400 1.0kb upstream 1.0kb upstream 1000 false Bd3: 32259516-32260515 Brachypodium distachyon
Bradi3g30400 1.0kb downstream 1.0kb downstream 3710 true Bd3: 32260516-32264225 Brachypodium distachyon
Bradi3g30400 1.0kb downstream 1.0kb downstream 1000 false Bd3: 32263226-32264225 Brachypodium distachyon
Bradi3g30400 2.0kb upstream 2.0kb upstream 4710 true Bd3: 32258516-32263225 Brachypodium distachyon
Bradi3g30400 2.0kb upstream 2.0kb upstream 2000 false Bd3: 32258516-32260515 Brachypodium distachyon
Bradi3g30400 2.0kb downstream 2.0kb downstream 4710 true Bd3: 32260516-32265225 Brachypodium distachyon
Bradi3g30400 2.0kb downstream 2.0kb downstream 2000 false Bd3: 32263226-32265225 Brachypodium distachyon
Bradi3g30400 5.0kb upstream 5.0kb upstream 7710 true Bd3: 32255516-32263225 Brachypodium distachyon
Bradi3g30400 5.0kb upstream 5.0kb upstream 5000 false Bd3: 32255516-32260515 Brachypodium distachyon
Bradi3g30400 5.0kb downstream 5.0kb downstream 7710 true Bd3: 32260516-32268225 Brachypodium distachyon
Bradi3g30400 5.0kb downstream 5.0kb downstream 5000 false Bd3: 32263226-32268225 Brachypodium distachyon
Bradi3g30400 10.0kb upstream 10.0kb upstream 12710 true Bd3: 32250516-32263225 Brachypodium distachyon
Bradi3g30400 10.0kb upstream 10.0kb upstream 10000 false Bd3: 32250516-32260515 Brachypodium distachyon
Bradi3g30400 10.0kb downstream 10.0kb downstream 12710 true Bd3: 32260516-32273225 Brachypodium distachyon
Bradi3g30400 10.0kb downstream 10.0kb downstream 10000 false Bd3: 32263226-32273225 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041512 5273 Angiosperm View MSA
124578627 5269 Grass View MSA
121351569 5274 Embryophyte View MSA
123382231 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.719        
cufflinks 3.347        
cufflinks 4.333        
cufflinks 2.988        
cufflinks 2.58        
cufflinks 3.39        
cufflinks 3.375        
cufflinks 3.778        
cufflinks 3.405        
cufflinks 4.298        
cufflinks 2.401       Low
cufflinks 2.964        
cufflinks 2.361       Low
cufflinks 2.242       Low
cufflinks 2.224       Low
cufflinks 2.957        
cufflinks 2.648        
cufflinks 5.151       High
cufflinks 3.309        
cufflinks 4.254        
cufflinks 6.728       High
cufflinks 3.534        
cufflinks 3.703        
cufflinks 3.763        
cufflinks 3.063        
cufflinks 3.531        
cufflinks 2.989        
cufflinks 4.432        
cufflinks 4.817       High
cufflinks 6.522       High

0 Strain